Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_N05
         (906 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    29   6.6  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    29   6.6  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
 Frame = +3

Query: 210 PXXXAXXXGXXPPXXLXRHXQXPSS--GXXPLTLXXXXXPXXXPXTXXWGXPPPPXVXXX 383
           P   A   G  PP    ++   P+      PL +     P   P    +G PPPP +   
Sbjct: 141 PPQPAPQYGPPPPKPAPQYGPPPTQYGPPPPLKIQHRPAPQYGPPKLQYGPPPPPQLLPS 200

Query: 384 P 386
           P
Sbjct: 201 P 201


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
 Frame = +3

Query: 210 PXXXAXXXGXXPPXXLXRHXQXPSS--GXXPLTLXXXXXPXXXPXTXXWGXPPPPXVXXX 383
           P   A   G  PP    ++   P+      PL +     P   P    +G PPPP +   
Sbjct: 141 PPQPAPQYGPPPPKPAPQYGPPPTQYGPPPPLKIQHRPAPQYGPPKLQYGPPPPPQLLPS 200

Query: 384 P 386
           P
Sbjct: 201 P 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,147,723
Number of Sequences: 53049
Number of extensions: 64098
Number of successful extensions: 137
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)