Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_N03
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 230 8e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 230 8e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 230 8e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 230 8e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 230 8e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 230 8e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 230 8e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 230 8e-61
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 166 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 226 HGFKGVTSRWHTKKLP 241
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 166 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 226 HGFKGVTSRWHTKKLP 241
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 197
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 198 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 254
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 255 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 68 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 128 HGFKGVTSRWHTKKLP 143
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 166 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 226 HGFKGVTSRWHTKKLP 241
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 197
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 198 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 254
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 255 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 68 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 128 HGFKGVTSRWHTKKLP 143
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (563), Expect = 8e-61
Identities = 108/164 (65%), Positives = 130/164 (79%)
Frame = -2
Query: 587 HKEXTPVRHTKXLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 408
H + P + K LRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 227 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 799 TXNEAVKQGQXKAHIMESXLTGGTIEDKVKWAQRTXGEPIPVDFVFCPR*ND*LHWCHQG 620
T + +++ Q KAH++E + GGTIE KV WA+ + + VD VF +G
Sbjct: 166 TQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Query: 619 QRIQRCHXSWHTKKXP 572
+ WHTKK P
Sbjct: 226 HGFKGVTSRWHTKKLP 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,034,629
Number of Sequences: 27780
Number of extensions: 377297
Number of successful extensions: 937
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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