Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_N02
         (820 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   329   2e-90
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   329   2e-90
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   329   2e-90
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   329   2e-90
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   329   2e-90
BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p pro...    29   7.6  
AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-P...    29   7.6  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  329 bits (809), Expect = 2e-90
 Identities = 151/175 (86%), Positives = 159/175 (90%)
 Frame = -1

Query: 619 KDTKGVTXXWHTKKXPRKTHKGLRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKIY 440
           K  KGVT  WHTKK PRKTHKGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIY
Sbjct: 237 KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIY 296

Query: 439 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 260
           RIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRII
Sbjct: 297 RIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRII 356

Query: 259 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           TLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 357 TLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 786 RDQKKXSHLWKSXXNGGTIXGPKVKWXREHXEKPIPVDSVXAQDEMIDCIGVTXGQ 619
           + ++K +H+ +   NGG+I   KVKW REH EKPI V +V  QDEMIDC+GVT G+
Sbjct: 183 KQRQKKAHVMEIQLNGGSIED-KVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 237


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  329 bits (809), Expect = 2e-90
 Identities = 151/175 (86%), Positives = 159/175 (90%)
 Frame = -1

Query: 619 KDTKGVTXXWHTKKXPRKTHKGLRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKIY 440
           K  KGVT  WHTKK PRKTHKGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIY
Sbjct: 226 KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIY 285

Query: 439 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 260
           RIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRII
Sbjct: 286 RIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRII 345

Query: 259 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           TLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 346 TLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 786 RDQKKXSHLWKSXXNGGTIXGPKVKWXREHXEKPIPVDSVXAQDEMIDCIGVTXGQ 619
           + ++K +H+ +   NGG+I   KVKW REH EKPI V +V  QDEMIDC+GVT G+
Sbjct: 172 KQRQKKAHVMEIQLNGGSIED-KVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 226


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  329 bits (809), Expect = 2e-90
 Identities = 151/175 (86%), Positives = 159/175 (90%)
 Frame = -1

Query: 619 KDTKGVTXXWHTKKXPRKTHKGLRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKIY 440
           K  KGVT  WHTKK PRKTHKGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIY
Sbjct: 213 KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIY 272

Query: 439 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 260
           RIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRII
Sbjct: 273 RIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRII 332

Query: 259 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           TLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 333 TLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 786 RDQKKXSHLWKSXXNGGTIXGPKVKWXREHXEKPIPVDSVXAQDEMIDCIGVTXGQ 619
           + ++K +H+ +   NGG+I   KVKW REH EKPI V +V  QDEMIDC+GVT G+
Sbjct: 159 KQRQKKAHVMEIQLNGGSIED-KVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 213


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  329 bits (809), Expect = 2e-90
 Identities = 151/175 (86%), Positives = 159/175 (90%)
 Frame = -1

Query: 619 KDTKGVTXXWHTKKXPRKTHKGLRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKIY 440
           K  KGVT  WHTKK PRKTHKGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIY
Sbjct: 213 KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIY 272

Query: 439 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 260
           RIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRII
Sbjct: 273 RIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRII 332

Query: 259 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           TLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 333 TLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 786 RDQKKXSHLWKSXXNGGTIXGPKVKWXREHXEKPIPVDSVXAQDEMIDCIGVTXGQ 619
           + ++K +H+ +   NGG+I   KVKW REH EKPI V +V  QDEMIDC+GVT G+
Sbjct: 159 KQRQKKAHVMEIQLNGGSIED-KVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 213


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  329 bits (809), Expect = 2e-90
 Identities = 151/175 (86%), Positives = 159/175 (90%)
 Frame = -1

Query: 619 KDTKGVTXXWHTKKXPRKTHKGLRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKIY 440
           K  KGVT  WHTKK PRKTHKGLRKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIY
Sbjct: 226 KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIY 285

Query: 439 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 260
           RIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRII
Sbjct: 286 RIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRII 345

Query: 259 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           TLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 346 TLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 786 RDQKKXSHLWKSXXNGGTIXGPKVKWXREHXEKPIPVDSVXAQDEMIDCIGVTXGQ 619
           + ++K +H+ +   NGG+I   KVKW REH EKPI V +V  QDEMIDC+GVT G+
Sbjct: 172 KQRQKKAHVMEIQLNGGSIED-KVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 226


>BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p
           protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 526 WHPFRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK-KDGKV 401
           +HPF +S         GY H+ E  KK  RI  G+H+ + G+V
Sbjct: 610 YHPFYISDDPVG----GYEHKREEEKKAVRIYAGVHRSRSGQV 648


>AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-PB,
           isoform B protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 526 WHPFRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK-KDGKV 401
           +HPF +S         GY H+ E  KK  RI  G+H+ + G+V
Sbjct: 610 YHPFYISDDPVG----GYEHKREEEKKAVRIYAGVHRSRSGQV 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,954,765
Number of Sequences: 53049
Number of extensions: 746785
Number of successful extensions: 1858
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1858
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)