Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_M17
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113265-1|AAM29270.1|  414|Drosophila melanogaster AT15673p pro...    30   4.4  
AE014298-2330|AAF48564.2|  621|Drosophila melanogaster CG8958-PA...    30   4.4  
Y17919-1|CAA76939.1| 1379|Drosophila melanogaster Pollux protein...    29   7.7  
U50542-1|AAB02200.1|  732|Drosophila melanogaster pollux protein.      29   7.7  
BT025850-1|ABF85750.1| 1260|Drosophila melanogaster IP14919p pro...    29   7.7  
AE014297-335|AAN13258.1|  732|Drosophila melanogaster CG1093-PB,...    29   7.7  
AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,...    29   7.7  

>AY113265-1|AAM29270.1|  414|Drosophila melanogaster AT15673p
           protein.
          Length = 414

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 92  TYVKGRLTNLIESPRQGLRWRPNPAPNAD 178
           T  + R T LI+S R+G  W P+  PN D
Sbjct: 167 TAAQARKTQLIQSLRRGTPWMPSVMPNDD 195


>AE014298-2330|AAF48564.2|  621|Drosophila melanogaster CG8958-PA
           protein.
          Length = 621

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 92  TYVKGRLTNLIESPRQGLRWRPNPAPNAD 178
           T  + R T LI+S R+G  W P+  PN D
Sbjct: 374 TAAQARKTQLIQSLRRGTPWMPSVMPNDD 402


>Y17919-1|CAA76939.1| 1379|Drosophila melanogaster Pollux protein
            protein.
          Length = 1379

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 566  RGPMSVPLGMGFIVLSQPHIRKNRSGGSPFRGLYQRSSARSVSP 435
            + P+ V  G+G   LS P    N SGGS F  +  R++  ++SP
Sbjct: 1226 KSPLEVDSGVG-TPLSPPSTASNSSGGSIFSRMGYRTTPPALSP 1268


>U50542-1|AAB02200.1|  732|Drosophila melanogaster pollux protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 566 RGPMSVPLGMGFIVLSQPHIRKNRSGGSPFRGLYQRSSARSVSP 435
           + P+ V  G+G   LS P    N SGGS F  +  R++  ++SP
Sbjct: 579 KSPLEVDSGVG-TPLSPPSTASNSSGGSIFSRMGYRTTPPALSP 621


>BT025850-1|ABF85750.1| 1260|Drosophila melanogaster IP14919p protein.
          Length = 1260

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 566  RGPMSVPLGMGFIVLSQPHIRKNRSGGSPFRGLYQRSSARSVSP 435
            + P+ V  G+G   LS P    N SGGS F  +  R++  ++SP
Sbjct: 1107 KSPLEVDSGVG-TPLSPPSTASNSSGGSIFSRMGYRTTPPALSP 1149


>AE014297-335|AAN13258.1|  732|Drosophila melanogaster CG1093-PB,
           isoform B protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 566 RGPMSVPLGMGFIVLSQPHIRKNRSGGSPFRGLYQRSSARSVSP 435
           + P+ V  G+G   LS P    N SGGS F  +  R++  ++SP
Sbjct: 579 KSPLEVDSGVG-TPLSPPSTASNSSGGSIFSRMGYRTTPPALSP 621


>AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,
            isoform A protein.
          Length = 1379

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 566  RGPMSVPLGMGFIVLSQPHIRKNRSGGSPFRGLYQRSSARSVSP 435
            + P+ V  G+G   LS P    N SGGS F  +  R++  ++SP
Sbjct: 1226 KSPLEVDSGVG-TPLSPPSTASNSSGGSIFSRMGYRTTPPALSP 1268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,990,329
Number of Sequences: 53049
Number of extensions: 1092171
Number of successful extensions: 3183
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)