Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_M14
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23177-4|AAM22055.1|  374|Caenorhabditis elegans Hypothetical pr...    46   2e-05
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ...    32   0.57 
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      31   1.3  
AL034489-8|CAI79278.1|   67|Caenorhabditis elegans Hypothetical ...    30   1.7  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   3.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   3.0  
Z66515-3|CAA91352.1|  322|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z66515-2|CAA91353.1|  543|Caenorhabditis elegans Hypothetical pr...    28   7.0  
S66936-1|AAB28820.1|  360|Caenorhabditis elegans Egl-43 protein.       28   7.0  
S66757-1|AAB28819.1|  581|Caenorhabditis elegans Egl-43 protein.       28   7.0  
AC084197-36|AAG23464.2|  381|Caenorhabditis elegans Hypothetical...    28   7.0  

>U23177-4|AAM22055.1|  374|Caenorhabditis elegans Hypothetical
           protein C56G2.7 protein.
          Length = 374

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = -2

Query: 335 VNVDLGSVLSASDVVSTASAPENAVRLAPHLPAQDD----VRTTLLSPXXXXXXXXXXXA 168
           V V L + LS   V   A    +A  LAPHLP  DD    +  T+ +P           A
Sbjct: 244 VAVSLATALSNETVAEVAR--NHAEELAPHLPTSDDPARELSETVRTPQFRQAADTLGHA 301

Query: 167 VGSGQMGPVMSQFGLPSEVSSAANNG 90
           + +GQ+GPV++QFG+      +AN G
Sbjct: 302 LQTGQLGPVVAQFGMDEATVGSANQG 327


>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
           protein C07H6.3 protein.
          Length = 1378

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 253 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSS 399
           AS T+F+ +  + T      T  +S   AP T + L  P PSGG +  S
Sbjct: 270 ASTTSFTSSARLSTPPRPTTTAAQSLSLAPQTPSPLSLPSPSGGQMSRS 318


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 342  WCSQCRS-GQRSVSFRRSVYCFGPGECRATGATPARPGRCKDHPALPAVRSGR 187
            W S  +S GQ  +  R+ +  F   EC    ++ A   RCKD P+  ++ SGR
Sbjct: 1091 WSSCSKSCGQDGIQTRQKLCLFNNAEC----SSYAESRRCKDLPSCSSISSGR 1139


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 342  WCSQCRS-GQRSVSFRRSVYCFGPGECRATGATPARPGRCKDHPALPAVRSGR 187
            W S  +S GQ  +  R+ +  F   EC    ++ A   RCKD P+  ++ SGR
Sbjct: 1091 WSSCSKSCGQDGIQTRQKLCLFNNAEC----SSYAESRRCKDLPSCSSISSGR 1139


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 342  WCSQCRS-GQRSVSFRRSVYCFGPGECRATGATPARPGRCKDHPALPAVRSGR 187
            W S  +S GQ  +  R+ +  F   EC    ++ A   RCKD P+  ++ SGR
Sbjct: 1091 WSSCSKSCGQDGIQTRQKLCLFNNAEC----SSYAESRRCKDLPSCSSISSGR 1139


>AL034489-8|CAI79278.1|   67|Caenorhabditis elegans Hypothetical
           protein Y7A5A.10 protein.
          Length = 67

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -2

Query: 392 GTAPPEGNGASRTAPVAGAVNVDLGSVLSASDVVSTASAPE 270
           GTAP   NGAS+T   AGA+  +L +  +    VSTA+A +
Sbjct: 23  GTAPK--NGASQTLQRAGAIEAELRAAEAKWTPVSTANAQD 61


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +1

Query: 253 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSSEK 405
           +S T+  G  AVDTTS +      ST   PA  A   +P PSG   P+++K
Sbjct: 41  SSSTSHVGTGAVDTTSSSASASGAST---PANQAASSSPAPSG--APAADK 86


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +1

Query: 253 ASRTAFSGAEAVDTTSEADRTLPRSTLTAPATGAVLDAPFPSGGAVPSSEK 405
           +S T+  G  AVDTTS +      ST   PA  A   +P PSG   P+++K
Sbjct: 41  SSSTSHVGTGAVDTTSSSASASGAST---PANQAASSSPAPSG--APAADK 86


>Z66515-3|CAA91352.1|  322|Caenorhabditis elegans Hypothetical
           protein R53.3b protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 436 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 347
           D+Y+C+ C   FP  A L R      G  P
Sbjct: 221 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 250


>Z66515-2|CAA91353.1|  543|Caenorhabditis elegans Hypothetical
           protein R53.3a protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 436 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 347
           D+Y+C+ C   FP  A L R      G  P
Sbjct: 442 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 471


>S66936-1|AAB28820.1|  360|Caenorhabditis elegans Egl-43 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 436 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 347
           D+Y+C+ C   FP  A L R      G  P
Sbjct: 221 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 250


>S66757-1|AAB28819.1|  581|Caenorhabditis elegans Egl-43 protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 436 DKYSCRICSVTFPN*AQLRRKGTVRQGRPP 347
           D+Y+C+ C   FP  A L R      G  P
Sbjct: 442 DRYTCKFCQKVFPRSANLTRHLRTHTGEQP 471


>AC084197-36|AAG23464.2|  381|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.24 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 441 KRTNIPVGSAALLFRTRHSSAGRERCVKDGPRSW 340
           K   I   S  +LF TRH +   E  +++ PRSW
Sbjct: 22  KSVAIDKNSVLVLFGTRHGNRHPEVFLQENPRSW 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,043
Number of Sequences: 27780
Number of extensions: 293578
Number of successful extensions: 875
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)