Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_M07
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 223 1e-58
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 30 2.3
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.2
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.2
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.2
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.2
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 223 bits (545), Expect = 1e-58
Identities = 102/172 (59%), Positives = 123/172 (71%)
Frame = -2
Query: 639 TPGHPVFATRYGKIAVNXCFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEA 460
T GHPVF T+YG+I +N C+GRHH NWMM+ NGAEI+FNPSAT+ SE +W +EA
Sbjct: 217 TLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEA 274
Query: 459 RNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSR 280
RNAAI N FT INRVG E FPNEFTS +G+PAHKD G FYGSSY PDG R P LSR
Sbjct: 275 RNAAIANHVFTVGINRVGTEVFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSR 334
Query: 279 TRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 124
R+G+LIA +DLNL RQ +D + MT RLDMY +++V DY+P + E
Sbjct: 335 VREGVLIAELDLNLCRQCKDAWGFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -1
Query: 721 GNGIGKLRKTHIPRVGGFNESNXYME 644
G IG+ RK HIPRVG FNES YME
Sbjct: 190 GRVIGRSRKNHIPRVGDFNESTYYME 215
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 794 SSXLEGXEKHSDILWNTAVVISDTGK 717
S LE E+ D++WNTAVVIS TG+
Sbjct: 166 SPILERDEEKDDVIWNTAVVISHTGR 191
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 460 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEAXVHRDLAVSGREYRMAG 636
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++AG
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPT-PFMSRDELIDNSVRKLAG 78
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 556 PVQDVVPSEAXVHRDLAVSGREYRMAGCYLPCXNWIR*NPRPSECGSCEASRSRFPVSLM 735
P++D +E VH D +G + G Y P + P C E+ + FPV +
Sbjct: 94 PMED---TEEIVHSDGYQTGARWMKTGVYFPKIGISKEQPDKERCLLLESLHAYFPVLVF 150
Query: 736 TTA 744
TT+
Sbjct: 151 TTS 153
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 174 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 281
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,409
Number of Sequences: 27780
Number of extensions: 384380
Number of successful extensions: 1034
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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