Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_M06
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1408 - 26353389-26355191 285 4e-77
03_03_0094 + 14378953-14380728 282 3e-76
04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955 102 4e-22
09_02_0420 + 9051728-9051754,9053244-9053530,9055263-9055500,905... 30 2.5
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 30 2.5
07_03_0466 + 18474929-18475315,18476035-18476298,18476717-184767... 30 2.5
05_01_0060 - 418559-418577,418655-418738,418857-418966,419467-41... 30 2.5
12_01_0400 + 3169597-3170504,3170510-3171269 29 3.3
06_02_0072 + 11152988-11153102,11153581-11153705,11153860-111540... 29 5.7
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 5.7
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 29 5.7
07_01_0437 - 3322132-3322251,3322345-3322569,3322953-3323120,332... 28 7.6
10_08_0565 + 18827298-18827361,18827473-18827784,18827886-188287... 28 10.0
09_02_0329 + 7311721-7311834,7312252-7312683 28 10.0
04_04_1033 - 30269639-30269734,30269838-30270257,30270450-302706... 28 10.0
>07_03_1408 - 26353389-26355191
Length = 600
Score = 285 bits (698), Expect = 4e-77
Identities = 118/187 (63%), Positives = 162/187 (86%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
LL+ D D+++ V W+ CEAG+Y+RT+CVHLGL+LGVG M ELRRVRSGI GE++ MVTM
Sbjct: 218 LLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGEQDNMVTM 277
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD++DA+W+ +N+ DETYLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK+++PG+LR+
Sbjct: 278 HDVMDARWAMDNYNDETYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRF 337
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
E+ I+V +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RDTYPRKWGLG
Sbjct: 338 ENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLG 397
Query: 235 PKASQKK 215
P A +KK
Sbjct: 398 PVALKKK 404
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV--EE 84
P+K G +L +KK +G LDK+GKPNE TP EW+ NV P GD +
Sbjct: 391 PRKWGLGPVAL-KKKKMVAEGLLDKHGKPNEKTPAEWIR-----NVAL-PTGGDAMIASI 443
Query: 83 GSRKRTASTANAEDPDVSIEVKQEKKK 3
+ A +D + EVK++KKK
Sbjct: 444 AAAPEEAKVKAEQDVVATEEVKEKKKK 470
>03_03_0094 + 14378953-14380728
Length = 591
Score = 282 bits (691), Expect = 3e-76
Identities = 118/187 (63%), Positives = 160/187 (85%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
LL+ D D+++ V W+ CEAG+Y+RT+CVHLGL+LGVG M ELRRVRSGI GE + MVTM
Sbjct: 222 LLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETDNMVTM 281
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD++DA+W+ +N DE+YLRR++ PLE LL ++KR+ +KDSAVNA+CYGAK+++PG+LR+
Sbjct: 282 HDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRF 341
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
E+ IEV +E+V++TTKGEA+A+ +A MTT+ MA+CDHG AK+KRV+M+RDTYPRKWGLG
Sbjct: 342 ENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLG 401
Query: 235 PKASQKK 215
P A +KK
Sbjct: 402 PVALKKK 408
Score = 51.2 bits (117), Expect = 9e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEG- 81
P+K G +L +KK +G LDK+GKPNE TP EWL + V P GD + G
Sbjct: 395 PRKWGLGPVAL-KKKKMVAEGLLDKHGKPNEKTPSEWLRNAV------LPAGGDAMIAGI 447
Query: 80 -SRKRTASTANAEDPDVSIEVKQEKKK 3
+ E+ DV+ E K++KKK
Sbjct: 448 AAAPEPEKPKVKEEADVAEETKEKKKK 474
>04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955
Length = 286
Score = 102 bits (244), Expect = 4e-22
Identities = 41/70 (58%), Positives = 57/70 (81%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
LL+ D ++++ V W+ CEAG+Y+RT+CVHLGL+LGVG M EL RVRSGI GE++ MVTM
Sbjct: 192 LLEHDAERHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELHRVRSGIHGEQDNMVTM 251
Query: 595 HDILDAQWSY 566
HD++DA+ +
Sbjct: 252 HDVMDARQEF 261
>09_02_0420 +
9051728-9051754,9053244-9053530,9055263-9055500,
9057010-9057204,9058075-9058339,9058520-9058827
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -1
Query: 275 NGTRHVPQKMGSRTES-LTEKKSSYXQGKLDKYGKPN--ENTPKEWLNS-YVNYNVKKEP 108
+GT+ +P +M SRTE+ + + S+ G D G W+ S V EP
Sbjct: 28 DGTQDLPSRMRSRTETVVVAPEPSHADGVKDSGGGGGCMFRVLPSWIGSRIVTTAGAPEP 87
Query: 107 ENGDGVEEG 81
+ DGVE+G
Sbjct: 88 SHVDGVEDG 96
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 182 YGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEKK 6
YGK +E L+ V +++ E + G E+G + R ++ + DV+ K++KK
Sbjct: 166 YGKDRTGREEEELSDEVVADMENENTDEVGDEDGDKDRESAGPSGRSLDVASSCKRQKK 224
>07_03_0466 +
18474929-18475315,18476035-18476298,18476717-18476755,
18476756-18476878,18477118-18477240
Length = 311
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 769 DFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVR-SGIQGEKE 611
+F ++ IG +++T C HLGL G ++ ++++ +G+QG K+
Sbjct: 80 NFSRELKIGEGGFGSVYKGFLKTSCGHLGLRNDSGNVVVAVKKLNPNGMQGHKQ 133
>05_01_0060 -
418559-418577,418655-418738,418857-418966,419467-419577,
419914-419992,420182-420264,420347-420439,420902-421810
Length = 495
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 760 QDKNIGVXWVXCEAGSYIRTMCVHLGLMLG 671
+D+ + V C G+YIR++C LG LG
Sbjct: 460 EDRQNLIFRVICSKGTYIRSLCADLGKALG 489
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 222 CEAFGPRPHFLGYVSRSIMTRLSFAATP 305
CEA P H Y +R + R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>06_02_0072 +
11152988-11153102,11153581-11153705,11153860-11154004,
11154219-11154284,11154418-11154540,11154839-11154961,
11156065-11156193,11156510-11156632,11156737-11156838,
11156943-11157065,11157169-11157270,11157370-11157492,
11157791-11157913,11158209-11158331,11158633-11158761,
11160210-11161039
Length = 867
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 275 NGTRHVPQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSY-VNYNVKKEPENG 99
+G R V GS+ E +T K + LDK K N + K+ L V Y K + +N
Sbjct: 276 DGLREVSVSYGSKGEVVTRKAFPMERYVLDKEPKRNLHRNKDELREVSVLYGSKGKLKNL 335
Query: 98 DGVEEGSRK-RTASTANAEDPDVSIEVKQEKK 6
G +K + A+ A+ ++ VS E+K
Sbjct: 336 FPTGYGHKKHKHANEADLKEVSVSYGSNDEEK 367
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/115 (21%), Positives = 48/115 (41%)
Frame = -2
Query: 634 SGIQGEKEGMVTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 455
+G+Q E + D + E D+++L ++ E +D C
Sbjct: 3365 NGLQREGTTVDVTGSKEDDMEAEEKQMDDSHLPAALQSTESSQPTEHAAPTQDDGNGLQC 3424
Query: 454 YGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAK 290
G V + G ED +EV+++++ + + L VAL +T + +H V A+
Sbjct: 3425 EGTTVDVSG--SKEDIMEVEEKLIDDISGSPSSHLPVALKSTESNQPAEHAVPAE 3477
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 116 KEPENGDGV-EEGSRKRTASTANAEDPDVSIEVKQEKKK 3
K PENG V +G +++ T+N S+ +KQE+++
Sbjct: 886 KHPENGGSVIADGDMQKSQDTSNKTKQGKSVLIKQEERE 924
>07_01_0437 -
3322132-3322251,3322345-3322569,3322953-3323120,
3323207-3323322,3323394-3323546,3323655-3323798,
3324475-3325255
Length = 568
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/103 (25%), Positives = 42/103 (40%)
Frame = -2
Query: 718 GSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKDETYL 539
G+Y + VHL + L GG++ + R V+ G EK I+ E +
Sbjct: 172 GAYEDAVAVHLVMELCAGGELFD-RIVQRGHYSEKAAAQLARVIIGV---VEACHSLGVM 227
Query: 538 RRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYED 410
R +KP L + HK +DS + + +G + Y D
Sbjct: 228 HRDLKPENFLFVNHK----EDSPLKTIDFGLSIFFKPGENYSD 266
>10_08_0565 +
18827298-18827361,18827473-18827784,18827886-18828758,
18828870-18828946,18829090-18829119,18829654-18829731
Length = 477
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 269 TRHVPQKMGSRTESLTEKKSSYXQ---GKLDKYGKPNENTPKEWLNSYVNYNVKKEPENG 99
T+HVP+ +G R + E++ Q G+ +K KP KE + N + G
Sbjct: 9 TKHVPEDVGLRNVAAAEEEGGQGQMHRGE-EKQHKPVLKKVKEKVKKIKN-TIAGGGGGG 66
Query: 98 DGVEEGSRKRTASTANAEDPDVSIEVKQ 15
G G + + S++++E+ + + ++
Sbjct: 67 HGGNNGGERASGSSSSSEEGEDDVAAQR 94
>09_02_0329 + 7311721-7311834,7312252-7312683
Length = 181
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -2
Query: 688 LGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKDETYLR 536
LGL VG + R S + G+KE M D +W Y H+ T R
Sbjct: 9 LGLPSSVGHPAVACHRYPSPVMGQKEKPSQM----DRRWMYYAHRSSTEYR 55
>04_04_1033 -
30269639-30269734,30269838-30270257,30270450-30270662,
30271071-30271949
Length = 535
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 338 DDHVYDGLMRSWCSRETQACHNGTRHVPQKMGSRTESLTEKKSS 207
D+ ++ + SW R ++ CH R V ++ + LTEKK +
Sbjct: 428 DNQLHGAIRSSWVQRRSKECHVDVRIVDDEVNIK---LTEKKKA 468
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,127,439
Number of Sequences: 37544
Number of extensions: 461691
Number of successful extensions: 1255
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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