Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_M06
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 321 2e-87
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 321 2e-87
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 321 2e-87
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 321 2e-87
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 321 2e-87
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 321 2e-87
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 319 9e-87
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 44.4 bits (100), Expect = 5e-04
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 111
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 321 bits (788), Expect = 2e-87
Identities = 135/187 (72%), Positives = 171/187 (91%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 319 bits (783), Expect = 9e-87
Identities = 134/187 (71%), Positives = 170/187 (90%)
Frame = -2
Query: 775 LLDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTM 596
++++D ++ +G+ WV CEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTM
Sbjct: 204 MIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTM 263
Query: 595 HDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
HD+LDAQW Y+NHKDE+YLRR + PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRY
Sbjct: 264 HDVLDAQWLYDNHKDESYLRRFVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRY 323
Query: 415 EDGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLG 236
EDGIEV+QEIV++TTKGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLG
Sbjct: 324 EDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLG 383
Query: 235 PKASQKK 215
PKASQKK
Sbjct: 384 PKASQKK 390
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----------VKKEP 108
P+K G ++ ++KK QG LDK+GKP ++TP W YV+Y+ V K P
Sbjct: 377 PRKWGLGPKA-SQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAP 435
Query: 107 E-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEKKK 3
+ + + RKR + + + E P + + +K+EKKK
Sbjct: 436 QVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKK 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,645,628
Number of Sequences: 237096
Number of extensions: 2435380
Number of successful extensions: 5881
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5881
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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