Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_M06
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 264 5e-71
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 30 1.7
U58754-6|AAK72081.1| 325|Caenorhabditis elegans Serpentine rece... 30 2.2
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 29 2.9
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 29 2.9
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 29 2.9
AF021905-1|AAB84394.1| 358|Caenorhabditis elegans presenilin pr... 29 2.9
AF000265-8|AAB52948.1| 358|Caenorhabditis elegans Homolog of pr... 29 2.9
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75541-2|CAA99854.2| 301|Caenorhabditis elegans Hypothetical pr... 29 5.1
U80838-6|AAC71115.1| 169|Caenorhabditis elegans Hypothetical pr... 28 6.8
U80028-10|AAN73868.2| 376|Caenorhabditis elegans Serpentine rec... 28 6.8
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z78018-1|CAB01445.1| 126|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 9.0
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 28 9.0
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 28 9.0
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 264 bits (647), Expect = 5e-71
Identities = 117/186 (62%), Positives = 151/186 (81%)
Frame = -2
Query: 772 LDFDQDKNIGVXWVXCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMH 593
+++D + +G+ CE+G+Y+RT+CVHLGL+LG GGQM ELRR RSGI E E MVTMH
Sbjct: 193 IEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSGICDENENMVTMH 252
Query: 592 DILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYE 413
D+LDAQ+ + KDE+Y+R +++PLE LL HKR+ +KDS +NA+CYGAK+L+PGILRY+
Sbjct: 253 DVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYGAKILIPGILRYD 312
Query: 412 DGIEVDQEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGP 233
D IEV +EIVI++TKGEA+ +A+A M TST+AS DHGV AK KRVIMERD Y RKWGLGP
Sbjct: 313 DDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIMERDVYGRKWGLGP 372
Query: 232 KASQKK 215
AS+KK
Sbjct: 373 VASKKK 378
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -1
Query: 224 TEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----VKKEPENGDGVEEGSRKRTAST 57
++KK G LDK+GKPN+ TPK W YV + VKKE + EE +K++ +
Sbjct: 375 SKKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQTSTKKEVKKEETPDEEEEEAPKKKSKKS 434
Query: 56 ANAEDPD 36
E D
Sbjct: 435 KKQESSD 441
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 173 PNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDVS 30
P E P E +S NV++ E+ D EEG+ T + ++E PDV+
Sbjct: 203 PTETEPSEETSSVPTENVEESEEDADEREEGT---TVNVNSSEVPDVA 247
>U58754-6|AAK72081.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 12 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 81 AFLDTVTILRFFLNIIVDVTV*PFFWCVLIWFA----IFVKFPLXV*GFFFCEAFGPRPH 248
A T +++ + +IV+ + FF C+ +F I L FC+ +GPR
Sbjct: 30 ALFQTPRVIKSYATLIVNFAITDFFACMFDFFVQQRLIPTGMTLAYVSNGFCKHWGPRTC 89
Query: 249 FLGY 260
F GY
Sbjct: 90 FFGY 93
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 233 ESLTEKKSSYXQGKLDKYGKPNENT-PKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAST 57
E +K +G+ D K E+ K+++ Y N N+K EPE DG++ + T
Sbjct: 54 EESDNEKLKGLRGRGDVEMKDEESEFEKKYMKGY-NENIKDEPEGQDGMKGIAMYST--- 109
Query: 56 ANAEDPDVSIEVKQEKKK 3
N +DP V+ +V ++++
Sbjct: 110 -NKDDPYVTEQVDSDEEE 126
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 78
P+K R ++ K Y KL+K TPK+ + +K+E V
Sbjct: 418 PEKQNKRKDTALNPKEKYCAQKLEKQLNDQTKTPKQKPKQETSAGIKRESTQRPCV---- 473
Query: 77 RKRTASTANAED 42
RT T+N++D
Sbjct: 474 IPRTFETSNSKD 485
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -1
Query: 257 PQKMGSRTESLTEKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 78
P+K R ++ K Y KL+K TPK+ + +K+E V
Sbjct: 556 PEKQNKRKDTALNPKEKYCAQKLEKQLNDQTKTPKQKPKQETSAGIKRESTQRPCV---- 611
Query: 77 RKRTASTANAED 42
RT T+N++D
Sbjct: 612 IPRTFETSNSKD 623
>AF021905-1|AAB84394.1| 358|Caenorhabditis elegans presenilin
protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 6 FFFLLHLYGDIGIFCVSC-ACRSLSAAFLDTVTILR--FFLNIIVDVTV*PFFWCVLIWF 176
FFFL+ +G +GI C+ + R L +L + L F LNI+ D TV + W
Sbjct: 123 FFFLILQFGGLGITCLHWKSHRRLHQFYLIMLAGLTAIFILNILPDWTVWMALTAISFWD 182
Query: 177 AIFVKFP 197
+ V P
Sbjct: 183 IVAVLTP 189
>AF000265-8|AAB52948.1| 358|Caenorhabditis elegans Homolog of
presenilin protein 1 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 6 FFFLLHLYGDIGIFCVSC-ACRSLSAAFLDTVTILR--FFLNIIVDVTV*PFFWCVLIWF 176
FFFL+ +G +GI C+ + R L +L + L F LNI+ D TV + W
Sbjct: 123 FFFLILQFGGLGITCLHWKSHRRLHQFYLIMLAGLTAIFILNILPDWTVWMALTAISFWD 182
Query: 177 AIFVKFP 197
+ V P
Sbjct: 183 IVAVLTP 189
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 263 HVPQKMGSRTESLTEKKSSYXQ--GKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV 90
H P + ++ S+TE+ S + + G ++ E K+W N + +++PE +
Sbjct: 2496 HKPGRKSAKP-SITERNSEFYKIGGSHEEENHRKEKNQKKWKNREDTFRRRRKPEYEEES 2554
Query: 89 EEGSRKRTASTANAED 42
EE R++ +E+
Sbjct: 2555 EELGRRKPRFGEESEE 2570
>Z75541-2|CAA99854.2| 301|Caenorhabditis elegans Hypothetical
protein F52B5.2 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 544 YLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 416
Y+ R IKP E LLI + I I D + KV+ PG L Y
Sbjct: 133 YIHRDIKP-ENLLIDGETICIADFGETVLSTSDKVVKPGTLPY 174
>U80838-6|AAC71115.1| 169|Caenorhabditis elegans Hypothetical
protein F47F6.4 protein.
Length = 169
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 111 FFLNIIVDVTV*PFFWCVLIWFAIFVKF 194
F N ++ V PF W V WFA V++
Sbjct: 108 FSANFNIEFKVLPFMWTVCYWFAPLVEY 135
>U80028-10|AAN73868.2| 376|Caenorhabditis elegans Serpentine
receptor, class w protein139 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 139 VTSTIMLRKNRRMVTVSRKAAESERQAQL 53
VT +++ KNRR ++ S+ +AES R L
Sbjct: 246 VTQLLLVNKNRRSISSSKSSAESLRTTHL 274
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 179 GKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAS---TANAEDPDVS 30
GKPN TPK S + + E ENG + R+R AS N + P++S
Sbjct: 536 GKPNNGTPKRMTFSPI--ADESEEENGARIPSPPRERRASGGRPGNNDGPNLS 586
>Z78018-1|CAB01445.1| 126|Caenorhabditis elegans Hypothetical
protein W07G4.1 protein.
Length = 126
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 15 LLHLYGDIGIFCVSCACRSLSAAFLDTVTILRFFLNIIVDVTV 143
+L L + I V A RSL+ F+D + F II D+T+
Sbjct: 69 VLLLPNQMNIITVVIADRSLTTNFMDITEDMMFITEIITDITM 111
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 212 SSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGD 96
S +G D +G +N EW+ + + +KE +NG+
Sbjct: 129 SQKMKGIKDGFGADGQNKWAEWMAKFEQFKQQKEDQNGN 167
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 623 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 507
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1237 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1275
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 623 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 507
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1903 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1941
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 623 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 507
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1908 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1946
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,792,920
Number of Sequences: 27780
Number of extensions: 397800
Number of successful extensions: 1194
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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