Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_M04
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 233 1e-61
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 241 PRKTHKG 247
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 253
Query: 533 L 531
+
Sbjct: 254 I 254
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 241 PRKTHKG 247
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 253
Query: 533 L 531
+
Sbjct: 254 I 254
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 142
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 143 PRKTHKG 149
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 155
Query: 533 L 531
+
Sbjct: 156 I 156
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -1
Query: 625 KGKGYKGVTSRWHTKKLPRKTHQG 554
+G G+KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 241 PRKTHKG 247
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 253
Query: 533 L 531
+
Sbjct: 254 I 254
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 142
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 143 PRKTHKG 149
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 155
Query: 533 L 531
+
Sbjct: 156 I 156
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -1
Query: 625 KGKGYKGVTSRWHTKKLPRKTHQG 554
+G G+KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 223
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 222 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 748 IQLNGGTIEDKVN-GPENIWRNLSL-SILCLPKMR*LTALVSPKGKGYKGVTSRWHTKKL 575
IQ+NGGTIE KV+ E++ + + + ++ +M + + +G G+KGVTSRWHTKKL
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 574 PRKTHQG 554
PRKTH+G
Sbjct: 241 PRKTHKG 247
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 713 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPRVLGKLPA 534
+WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T + L K+
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVAC 253
Query: 533 L 531
+
Sbjct: 254 I 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,137,705
Number of Sequences: 27780
Number of extensions: 436209
Number of successful extensions: 1118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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