Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_L24
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   347   8e-96
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   347   8e-96
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   347   8e-96
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   347   8e-96
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   347   8e-96

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  347 bits (854), Expect = 8e-96
 Identities = 167/230 (72%), Positives = 185/230 (80%)
 Frame = -2

Query: 784 VKQRQKKAHIMEIQLNRGTIEDKVKWAREHXENLSLSILCLPKMK*LTALXSPRAKDTKX 605
           +KQRQKKAH+MEIQLN G+IEDKVKWAREH E          + + +  +   + K  K 
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 241

Query: 604 SLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 425
                  +  P +  KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 242 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 301

Query: 424 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 245
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 302 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 361

Query: 244 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 362 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  347 bits (854), Expect = 8e-96
 Identities = 167/230 (72%), Positives = 185/230 (80%)
 Frame = -2

Query: 784 VKQRQKKAHIMEIQLNRGTIEDKVKWAREHXENLSLSILCLPKMK*LTALXSPRAKDTKX 605
           +KQRQKKAH+MEIQLN G+IEDKVKWAREH E          + + +  +   + K  K 
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 604 SLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 425
                  +  P +  KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 424 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 245
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350

Query: 244 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  347 bits (854), Expect = 8e-96
 Identities = 167/230 (72%), Positives = 185/230 (80%)
 Frame = -2

Query: 784 VKQRQKKAHIMEIQLNRGTIEDKVKWAREHXENLSLSILCLPKMK*LTALXSPRAKDTKX 605
           +KQRQKKAH+MEIQLN G+IEDKVKWAREH E          + + +  +   + K  K 
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 604 SLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 425
                  +  P +  KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 424 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 245
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337

Query: 244 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  347 bits (854), Expect = 8e-96
 Identities = 167/230 (72%), Positives = 185/230 (80%)
 Frame = -2

Query: 784 VKQRQKKAHIMEIQLNRGTIEDKVKWAREHXENLSLSILCLPKMK*LTALXSPRAKDTKX 605
           +KQRQKKAH+MEIQLN G+IEDKVKWAREH E          + + +  +   + K  K 
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 604 SLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 425
                  +  P +  KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 424 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 245
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337

Query: 244 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  347 bits (854), Expect = 8e-96
 Identities = 167/230 (72%), Positives = 185/230 (80%)
 Frame = -2

Query: 784 VKQRQKKAHIMEIQLNRGTIEDKVKWAREHXENLSLSILCLPKMK*LTALXSPRAKDTKX 605
           +KQRQKKAH+MEIQLN G+IEDKVKWAREH E          + + +  +   + K  K 
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 604 SLLVGTQRSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 425
                  +  P +  KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 424 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 245
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350

Query: 244 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 95
           L  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,502,054
Number of Sequences: 53049
Number of extensions: 791304
Number of successful extensions: 2176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)