Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_L23
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    33   0.36 
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373...    30   2.5  
05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581     29   3.3  
03_05_0183 - 21681673-21682524                                         29   4.4  
07_03_1086 + 23858419-23859423,23859527-23859610                       29   5.8  
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993...    29   5.8  
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164...    28   7.6  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 88  PSTTPRQERKSSTDYTEPRHRTELYPDLRSRDARVKKKTDSID 216
           PS TP  ER  S+D   PR     Y   R+RD    K+  S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407


>06_03_1055 -
           27234824-27234838,27236087-27236125,27236322-27237388,
           27237422-27237630,27237650-27238053
          Length = 577

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 356 ASLAESGKDMLTVEPRESGGSKQCDFTSRASHSKRETRRRSPFGS 222
           A+ A +GK +   E  E   S+QCD T    +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473


>05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581
          Length = 311

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 443 GHLVHALGR-AAGGAKLPSAGLCLNASKAEASLA 345
           G LV  L R   GG    SAG+C   S+ +ASLA
Sbjct: 203 GRLVETLARDGGGGGGAYSAGVCFYGSRMDASLA 236


>03_05_0183 - 21681673-21682524
          Length = 283

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 655 SQAFIATLLFDPSMSALPIIAKQNSPS 575
           SQAF A LL D + +A+P++  Q  P+
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPA 255


>07_03_1086 + 23858419-23859423,23859527-23859610
          Length = 362

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
 Frame = -3

Query: 503 LLMACRCDSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNA-----SKAEASLAES 339
           LL    CD N A      +   LVHAL  AA  A   +A   L         A AS+  +
Sbjct: 129 LLNLSICDENKAIIVEAGAIRPLVHALKSAASPAARENAACALLRLSQLDGSAAASIGRA 188

Query: 338 GKDMLTVEPRESGGSK 291
           G   L V   E+GG++
Sbjct: 189 GAIPLLVSLLETGGAR 204


>02_01_0015 -
           98311-98412,98635-98707,98830-98921,99139-99230,
           99363-99432,99683-99781,100008-100093,100541-100655,
           100853-100918,101064-101143,101226-101301,101915-102151,
           102559-102590,102993-103047,103384-103498,104497-104579,
           105182-105232,105740-105802,105945-106010,106144-106279,
           106503-106591,106844-106964,107138-107340,107434-107820
          Length = 862

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/76 (26%), Positives = 30/76 (39%)
 Frame = -3

Query: 374 NASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRASHSKRETRRRSPFGSRRSMLSVFF 195
           N + AEA L        T     +    QC  T RA H   +    +   +  ++L++  
Sbjct: 242 NFADAEALLFSGMLKRTTAATNANSNRSQCIITIRAVHKSSDAESENSLNN--AVLTIAD 299

Query: 194 LTRASRLRRSGYNSVR 147
           L  A R RR+G    R
Sbjct: 300 LAGAERERRTGNQGTR 315


>08_02_1081 +
           24215323-24215335,24215450-24215572,24216241-24216489,
           24218517-24218720,24218864-24218993,24219610-24219679,
           24219766-24219900,24219996-24220209,24220314-24220455,
           24220630-24220851,24220997-24221195
          Length = 566

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 305 SGGSKQCDFTSRASHSKRETRRRSPFGSRRSML 207
           S G+ Q   T R+ HS  E RRRS    R  +L
Sbjct: 212 SAGTDQMPNTPRSKHSATEQRRRSKINDRFQLL 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,115,440
Number of Sequences: 37544
Number of extensions: 482622
Number of successful extensions: 1414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)