Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_L19
         (960 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    28   2.2  
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         32   2.7  
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        32   2.7  
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     32   2.7  
AF065164-1|AAC28444.2|  889|Homo sapiens hyperpolarization-activ...    31   6.2  

>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 27.9 bits (59), Expect(2) = 2.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 596 PPPXFFFFFXXXTXXXXXXXPPPPXXXKKKPPPPP 492
           PPP   F             PPPP      PPPPP
Sbjct: 318 PPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPP 352



 Score = 23.4 bits (48), Expect(2) = 2.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 695 PPPPXPPP 672
           PPPP PPP
Sbjct: 313 PPPPVPPP 320


>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 19/70 (27%), Positives = 19/70 (27%)
 Frame = -2

Query: 695 PPPPXPPPXXXXXXXXXXXXXXXXFFXXXXXXXPPPXFFFFFXXXTXXXXXXXPPPPXXX 516
           PPPP PPP                         PPP         T       PPPP   
Sbjct: 711 PPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 770

Query: 515 KKKPPPPPXK 486
              PP  P K
Sbjct: 771 APLPPQAPPK 780


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 19/70 (27%), Positives = 19/70 (27%)
 Frame = -2

Query: 695 PPPPXPPPXXXXXXXXXXXXXXXXFFXXXXXXXPPPXFFFFFXXXTXXXXXXXPPPPXXX 516
           PPPP PPP                         PPP         T       PPPP   
Sbjct: 711 PPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 770

Query: 515 KKKPPPPPXK 486
              PP  P K
Sbjct: 771 APLPPQAPPK 780


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 19/70 (27%), Positives = 19/70 (27%)
 Frame = -2

Query: 695 PPPPXPPPXXXXXXXXXXXXXXXXFFXXXXXXXPPPXFFFFFXXXTXXXXXXXPPPPXXX 516
           PPPP PPP                         PPP         T       PPPP   
Sbjct: 697 PPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 756

Query: 515 KKKPPPPPXK 486
              PP  P K
Sbjct: 757 APLPPQAPPK 766


>AF065164-1|AAC28444.2|  889|Homo sapiens
           hyperpolarization-activated, cyclic nucleotide-gated
           channel 2 protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 536 PPPPXXXKKKPPPPP 492
           PPPP   K++PPPPP
Sbjct: 25  PPPPRPPKQQPPPPP 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,244,438
Number of Sequences: 237096
Number of extensions: 1688669
Number of successful extensions: 30226
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20352
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)