Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_L18
(1167 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.073
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.073
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.073
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.89
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 32 0.89
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 32 0.89
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 31 1.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 29 4.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.3
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 6.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 8.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 8.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.3
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.073
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP GG PPPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXG----GGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G GG PPPP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G PPPP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGG--GGXXXPPPP 865
P PP GG P PPP GG GG PPPP
Sbjct: 758 PPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 888 PPPPXXGGGXXXXXXXXXPPPPXXGG 965
PPPP GG PPPP GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.073
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP GG PPPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXG----GGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G GG PPPP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G PPPP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGG--GGXXXPPPP 865
P PP GG P PPP GG GG PPPP
Sbjct: 758 PPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 888 PPPPXXGGGXXXXXXXXXPPPPXXGG 965
PPPP GG PPPP GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.073
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP GG PPPP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXG----GGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G GG PPPP PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP GG P PPP G PPPP PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGG--GGXXXPPPP 865
P PP GG P PPP GG GG PPPP
Sbjct: 341 PPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 888 PPPPXXGGGXXXXXXXXXPPPPXXGG 965
PPPP GG PPPP GG
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGG 350
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPP-------XXGGGXGXXXXXXXPPPPXXGGXG 970
GG GGGG PPP GGG G PP P GG G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXGXXXXXXXPPPPXXGGXG 970
GGGG GGG G PP P GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCG 60
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPP-------XXGGGXGXXXXXXXPPPPXXGGXG 970
GG GGGG PPP GGG G PP P GG G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXGXXXXXXXPPPPXXGGXG 970
GGGG GGG G PP P GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCG 60
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.9 bits (69), Expect = 0.89
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +2
Query: 731 PPPPXXXXXGGXXXKKKKKXXFFXXXXXXXXXXGGXXXXXXXXXXG-GGGXXXPPPPXXG 907
P PP G +++++ + GG G GGG P P
Sbjct: 607 PAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPP 666
Query: 908 GGXGXXXXXXXPPPPXXG 961
GG G PPPP G
Sbjct: 667 GGLGGFMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.9 bits (69), Expect = 0.89
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +2
Query: 731 PPPPXXXXXGGXXXKKKKKXXFFXXXXXXXXXXGGXXXXXXXXXXG-GGGXXXPPPPXXG 907
P PP G +++++ + GG G GGG P P
Sbjct: 607 PAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPP 666
Query: 908 GGXGXXXXXXXPPPPXXG 961
GG G PPPP G
Sbjct: 667 GGLGGFMPPPPPPPPMPG 684
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 960 PXXGGGGXXXXXXXPXPPPXXGGGGXXXPPP 868
P GGGG P PPP G GG PPP
Sbjct: 20 PSGGGGGCGCA---PPPPPACGCGGGAAPPP 47
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 969 PXPPXX----GGGGXXXXXXXPXPPPXXGGGGXXXPPP 868
P PP GGGG P P GGGG PPP
Sbjct: 33 PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXGXXXXXXXPPPPXXGG 964
GGGG PP P GGG G P P GG
Sbjct: 62 GGGGCCPPPAPACGGGCG----GGVAPAPIGGG 90
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPP 865
P PP G P PPP G PPPP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 918 PXPPPXXGGGGXXXPPPP 865
P PPP GGG PPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPP 57
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 918 PXPPPXXGGGGXXXPPPP 865
P PPP GGG PPPP
Sbjct: 41 PPPPPPCGGGYEAPPPPP 58
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 963 PPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPP 865
PP GG P PPP G PPPP
Sbjct: 219 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 963 PPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPP 865
PP GG P PPP G PPPP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 963 PPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPP 865
PP GG P PPP G PPPP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPPXXGGGXG 919
GG GGG PPPP GGG G
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCG 66
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPPXXGGGXGXXXXXXXPPPPXXGGXG 970
GG GGGG GGG G PPPP G G
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPPXXGGGXG 919
GG GGG PPPP GGG G
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCG 123
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 830 GGXXXXXXXXXXGGGGXXXPPPPXXGGGXG 919
GG GG G PPPP GGG G
Sbjct: 30 GGGCGGCGGGCGGGCGCAPPPPPCCGGGCG 59
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 948 GGGXXXXXXXPXPPPXXGGGGXXXPP 871
GGG P PPP G GG PP
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLPP 47
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXG 919
GGGG PPP GGG G
Sbjct: 266 GGGGGYPQPPPQQGGGGG 283
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXG 919
GGGG PPP GGG G
Sbjct: 267 GGGGYPQPPPQQGGGGGG 284
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP G P PP GG PPPP PP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 365
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 969 PXPPXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
P PP G P PP GG PPPP PP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 375
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 960 PXXGGGGXXXXXXXPXPPPXXGGGGXXXPPPP 865
P GGGG P P GGGG PP
Sbjct: 20 PSGGGGGCGCAPPPPPPACGCGGGGGGYAAPP 51
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = -1
Query: 948 GGGXXXXXXXPXPPPXXG---GGGXXXPPPP 865
GGG P PPP G GGG PPP
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGGYAAPPP 52
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 951 GGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
G GG P P GGGG PP P PP
Sbjct: 617 GPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 951 GGGGXXXXXXXPXPPPXXGGGGXXXPPPPXXXXXXXXXXPP 829
G GG P P GGGG PP P PP
Sbjct: 617 GPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 889 PPPPXGGGXXXXXXXXXPPPPXXXG 963
PPPP GG PPPP G
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 889 PPPPXGGGXXXXXXXXXPPPPXXXG 963
PPPP GG PPPP G
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 889 PPPPXGGGXXXXXXXXXPPPPXXXG 963
PPPP GG PPPP G
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRG 311
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 866 GGGGXXXPPPPXXGGGXG 919
GGG PPPP GGG G
Sbjct: 25 GGGCCAPPPPPPCGGGCG 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,786,474
Number of Sequences: 27780
Number of extensions: 268604
Number of successful extensions: 2085
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3182509690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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