Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_L17
(837 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein. 30 4.5
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 30 4.5
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 30 4.5
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 30 4.5
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 30 4.5
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 30 4.5
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 30 4.5
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 29 6.0
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 29 6.0
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 29 6.0
AE014296-3128|AAF49173.1| 224|Drosophila melanogaster CG14089-P... 29 6.0
>V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein.
Length = 469
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 66 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 102
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 638 PGKXGGRXXPGXXGXPGXXXXXXPXRP-PXXPPXXXG 531
PGK G R PG G PG RP P PP G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNG 863
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
protein.
Length = 1458
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 264 HAPHHALCSHDHSGSGVRSQVLERLEM 344
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 264 HAPHHALCSHDHSGSGVRSQVLERLEM 344
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 264 HAPHHALCSHDHSGSGVRSQVLERLEM 344
H PHH H H+G+G Q E+L++
Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQL 971
>AE014296-3128|AAF49173.1| 224|Drosophila melanogaster CG14089-PA
protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 547 GXXGGRXGXXXXXXPGXPXXPGXXRPPXFPGXAF 648
G G R PG P PG PP +PG ++
Sbjct: 115 GEKGPRGDKGHPGMPGIPGQPGPQGPPGYPGGSY 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,432,917
Number of Sequences: 53049
Number of extensions: 204045
Number of successful extensions: 847
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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