Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_L16
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   299   4e-81
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   299   4e-81
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   299   4e-81
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   299   4e-81
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   299   4e-81

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  299 bits (733), Expect = 4e-81
 Identities = 148/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
 Frame = -2

Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
           NGG+IEDKV    E+  + + +S +   + + +  +   + K  K        +  P + 
Sbjct: 197 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 255

Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
            K LRKVACIG WHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNAS
Sbjct: 256 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAS 315

Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
           TEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I 
Sbjct: 316 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIK 375

Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 376 LKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  299 bits (733), Expect = 4e-81
 Identities = 148/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
 Frame = -2

Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
           NGG+IEDKV    E+  + + +S +   + + +  +   + K  K        +  P + 
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244

Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
            K LRKVACIG WHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNAS
Sbjct: 245 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAS 304

Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
           TEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I 
Sbjct: 305 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIK 364

Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 365 LKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  299 bits (733), Expect = 4e-81
 Identities = 148/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
 Frame = -2

Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
           NGG+IEDKV    E+  + + +S +   + + +  +   + K  K        +  P + 
Sbjct: 173 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 231

Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
            K LRKVACIG WHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNAS
Sbjct: 232 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAS 291

Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
           TEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I 
Sbjct: 292 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIK 351

Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 352 LKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  299 bits (733), Expect = 4e-81
 Identities = 148/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
 Frame = -2

Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
           NGG+IEDKV    E+  + + +S +   + + +  +   + K  K        +  P + 
Sbjct: 173 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 231

Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
            K LRKVACIG WHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNAS
Sbjct: 232 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAS 291

Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
           TEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I 
Sbjct: 292 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIK 351

Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 352 LKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  299 bits (733), Expect = 4e-81
 Identities = 148/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
 Frame = -2

Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
           NGG+IEDKV    E+  + + +S +   + + +  +   + K  K        +  P + 
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244

Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
            K LRKVACIG WHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNAS
Sbjct: 245 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAS 304

Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
           TEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I 
Sbjct: 305 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIK 364

Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 365 LKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,790,180
Number of Sequences: 53049
Number of extensions: 772794
Number of successful extensions: 1977
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)