Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_L16
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 231 5e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 231 5e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 231 5e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 231 5e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 231 5e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 231 5e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 229 2e-60
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 229 2e-60
AL032623-6|CAA21513.1| 198|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 244
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 245 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 301
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 361
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 244
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 245 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 301
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 361
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 88 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 146
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 147 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 203
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 204 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 263
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 264 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 244
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 245 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 301
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 361
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 88 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 146
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 147 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 203
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 204 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 263
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 264 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 231 bits (565), Expect = 5e-61
Identities = 118/215 (54%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Frame = -2
Query: 737 NGGTIEDKVN-GPENXWRNLSLSILCLPKMK*LTALXSPRXKDTKVSLLVGTQRSYPVRH 561
NGGTIE KV+ E+ + + + + + + + + R K + P +
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKT 244
Query: 560 TKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAS 381
K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN S
Sbjct: 245 HKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGS 301
Query: 380 TEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKIN 201
TE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKIN
Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 361
Query: 200 LKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
LK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (559), Expect = 2e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -2
Query: 581 RSYPVRHTKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 666 VFAQDEMIDCIGVTKXKGYKGVTSRWHTKKLPRKTHQG 553
V A +MID IGVT+ G+KGVTSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (559), Expect = 2e-60
Identities = 107/162 (66%), Positives = 129/162 (79%)
Frame = -2
Query: 581 RSYPVRHTKXLRKVACIGTWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 402
+ P + K LRKVACIG WHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 401 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 222
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 221 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 666 VFAQDEMIDCIGVTKXKGYKGVTSRWHTKKLPRKTHQG 553
V A +MID IGVT+ G+KGVTSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>AL032623-6|CAA21513.1| 198|Caenorhabditis elegans Hypothetical
protein Y43F8B.5 protein.
Length = 198
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 656 WANTESTGIGFSXCSLXHSLCPRWY 730
WA + S G GFS C + S RWY
Sbjct: 134 WAKSSSVGCGFSPCEI-DSQGRRWY 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,403,283
Number of Sequences: 27780
Number of extensions: 399152
Number of successful extensions: 990
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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