Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_L12
(1164 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 32 0.67
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.67
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.67
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.67
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.6
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.3
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 32.3 bits (70), Expect = 0.67
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 766 GGGGXXXXXXAGGGGGGXXXXXXXXXYXKRGGXPPPXP 653
GGGG A GG GG GG PPP P
Sbjct: 126 GGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAP 163
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.67
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 663 GGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 660 GGGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.67
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 663 GGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 660 GGGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.67
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 663 GGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 660 GGGXPPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
GG PP PPPPPP PPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 343 PPPPPPGGCPPPPPPPP 359
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPP 370
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 672 PPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
PP+ PPPPPP PPPP
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP+ PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPP 1359
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 41 PPPPPPCGGGYEAPPPP 57
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 252 PPPPPPCPMPIPCPPPP 268
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 672 PPLXX*XXXXXXXXXPPPPPPAXXXXXXPPPP 767
PP+ PPPPPP PPPP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 479 PPPPPPENEPEEFPPPP 495
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 85 PPPPPPPPPTLKAPPPP 101
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPP 592
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 577 PPPPPPPPMLGGPPPPP 593
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 578 PPPPPPPMLGGPPPPPP 594
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 717 PPPPPPAXXXXXXPPPP 767
PPPPPP PPPP
Sbjct: 579 PPPPPPMLGGPPPPPPP 595
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -3
Query: 766 GGGGXXXXXXAGGGG--GGXXXXXXXXXYXKRGGXPPPXP 653
GGGG GGGG GG Y PPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -3
Query: 766 GGGGXXXXXXAGGGG--GGXXXXXXXXXYXKRGGXPPPXP 653
GGGG GGGG GG Y PPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,347,016
Number of Sequences: 27780
Number of extensions: 241481
Number of successful extensions: 4201
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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