BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_L08
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035882-1|AAH35882.1| 495|Homo sapiens C20orf42 protein protein. 32 2.8
AY137240-1|AAM94174.1| 677|Homo sapiens Kindler syndrome protei... 32 2.8
AL118505-2|CAC03433.2| 677|Homo sapiens chromosome 20 open read... 32 2.8
AK092195-1|BAC03826.1| 459|Homo sapiens protein ( Homo sapiens ... 32 2.8
AF443278-1|AAN75822.1| 677|Homo sapiens URP1 protein. 32 2.8
AB105105-1|BAD12269.1| 677|Homo sapiens DTGCU2 protein. 32 2.8
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 31 5.0
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 31 5.0
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 31 6.5
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 31 6.5
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 31 6.5
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 31 6.5
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 31 6.5
>BC035882-1|AAH35882.1| 495|Homo sapiens C20orf42 protein protein.
Length = 495
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 179 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 238
Query: 522 SL 517
SL
Sbjct: 239 SL 240
>AY137240-1|AAM94174.1| 677|Homo sapiens Kindler syndrome protein
protein.
Length = 677
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 179 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 238
Query: 522 SL 517
SL
Sbjct: 239 SL 240
>AL118505-2|CAC03433.2| 677|Homo sapiens chromosome 20 open reading
frame 42 protein.
Length = 677
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 179 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 238
Query: 522 SL 517
SL
Sbjct: 239 SL 240
>AK092195-1|BAC03826.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ34876 fis, clone NT2NE2015362, moderately
similar to Mitogen inducible gene mig-2. ).
Length = 459
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 84 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 143
Query: 522 SL 517
SL
Sbjct: 144 SL 145
>AF443278-1|AAN75822.1| 677|Homo sapiens URP1 protein.
Length = 677
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 179 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 238
Query: 522 SL 517
SL
Sbjct: 239 SL 240
>AB105105-1|BAD12269.1| 677|Homo sapiens DTGCU2 protein.
Length = 677
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 702 STSLRSRYINPIINPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
S L S+ + PI +P TP + +T S +PLT +PP S EA + P
Sbjct: 179 SPGLYSKTMTPIYDPINGTPASSTMTWFSDSPLTEQNCSILAFSQPPQSPEALADMYQPR 238
Query: 522 SL 517
SL
Sbjct: 239 SL 240
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 663 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 663 NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = -1
Query: 696 SLRSRYINPIINP---RFHTP---TTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAP- 544
SL + P+ NP + TP + D TS + P TP E +P PP S P
Sbjct: 174 SLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNTKPCPPTPTTPETSPPPPPPPPSSTPC 233
Query: 543 SAYLTPSSL 517
SA+LTPSSL
Sbjct: 234 SAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = -1
Query: 696 SLRSRYINPIINP---RFHTP---TTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAP- 544
SL + P+ NP + TP + D TS + P TP E +P PP S P
Sbjct: 17 SLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNTKPCPPTPTTPETSPPPPPPPPSSTPC 76
Query: 543 SAYLTPSSL 517
SA+LTPSSL
Sbjct: 77 SAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = -1
Query: 696 SLRSRYINPIINP---RFHTP---TTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAP- 544
SL + P+ NP + TP + D TS + P TP E +P PP S P
Sbjct: 313 SLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNTKPCPPTPTTPETSPPPPPPPPSSTPC 372
Query: 543 SAYLTPSSL 517
SA+LTPSSL
Sbjct: 373 SAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = -1
Query: 696 SLRSRYINPIINP---RFHTP---TTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAP- 544
SL + P+ NP + TP + D TS + P TP E +P PP S P
Sbjct: 313 SLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNTKPCPPTPTTPETSPPPPPPPPSSTPC 372
Query: 543 SAYLTPSSL 517
SA+LTPSSL
Sbjct: 373 SAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = -1
Query: 696 SLRSRYINPIINP---RFHTP---TTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAP- 544
SL + P+ NP + TP + D TS + P TP E +P PP S P
Sbjct: 313 SLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNTKPCPPTPTTPETSPPPPPPPPSSTPC 372
Query: 543 SAYLTPSSL 517
SA+LTPSSL
Sbjct: 373 SAHLTPSSL 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,945,508
Number of Sequences: 237096
Number of extensions: 2370323
Number of successful extensions: 5904
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5904
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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