Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_K24
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   131   5e-31
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   5.2  
AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ...    28   6.9  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  131 bits (317), Expect = 5e-31
 Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
 Frame = -2

Query: 768 NPXXXXVI*XRPLVQRXLXKLPRTPGVTLXAXRSHQXLLLTXSKLHSREPRXLIVLDPAQ 589
           NP    V+  RP  QR L K     G T    R     L    +   +EPR L++ DP  
Sbjct: 70  NPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRI 129

Query: 588 DHQPITEASYVNIPVIALCNTDSPLRXVXIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 409
           DHQ +TEASYV +PVI+  NT+SPL+ + I +PCN K   SIGLMWW+LARE+L LRG +
Sbjct: 130 DHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKI 189

Query: 408 PRDQRW-----DVVVDLFFYRDP 355
            R   +     +++ DL+FYRDP
Sbjct: 190 SRQTGFVLEGKEIMPDLYFYRDP 212


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 213 CCTRCGSCFWSTPCSRRMVCP 151
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical
           protein F44E7.4d protein.
          Length = 984

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
           S   +P + IL  + +L K EP+R+++    L P      V      GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511


>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
           protein F44E7.4c protein.
          Length = 1008

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
           S   +P + IL  + +L K EP+R+++    L P      V      GQE
Sbjct: 403 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 452


>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
           protein F44E7.4a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
           S   +P + IL  + +L K EP+R+++    L P      V      GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511


>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
           protein F44E7.4b protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
           S   +P + IL  + +L K EP+R+++    L P      V      GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 483 TKSSHSIGLMWWLLA 439
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,812,463
Number of Sequences: 27780
Number of extensions: 275492
Number of successful extensions: 741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)