Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_K12
(820 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 31 1.9
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 31 2.5
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 31 2.5
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 31 2.5
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 31 2.5
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 31 2.5
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 31 2.5
AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p pro... 30 3.3
AE014297-3010|AAF55896.1| 479|Drosophila melanogaster CG6545-PA... 30 3.3
AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA... 30 3.3
AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC... 30 3.3
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 310 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 367
Query: 506 KGVSPP 489
PP
Sbjct: 368 GSGPPP 373
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 686 RVHQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 507
R P Q P S+H P + P P T PG PP ++P A+ T G+
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 506 KGVSPP 489
PP
Sbjct: 1200 GSGPPP 1205
>AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p
protein.
Length = 292
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = -3
Query: 680 HQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
H P H + + P P+P P++P PG P + P + PS L
Sbjct: 147 HHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHSPSQAMYPLDFFPPSPL 201
>AE014297-3010|AAF55896.1| 479|Drosophila melanogaster CG6545-PA
protein.
Length = 479
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 729 GXXPYASSHPSPXISGTSTRSSNPRFHTPTTPDLT--SISNQSPDAVLEGVRA 577
G P HP + +S+ SS PR HTP+ P +NQ+ + +EGV++
Sbjct: 82 GNLPEDYFHPLKRLRMSSS-SSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKS 133
>AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA,
isoform A protein.
Length = 557
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = -3
Query: 680 HQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
H P H + + P P+P P++P PG P + P + PS L
Sbjct: 370 HHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHSPSQAMYPLDFFPPSPL 424
>AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC,
isoform C protein.
Length = 891
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = -3
Query: 680 HQPDHQIPDSIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
H P H + + P P+P P++P PG P + P + PS L
Sbjct: 704 HHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHSPSQAMYPLDFFPPSPL 758
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,798,735
Number of Sequences: 53049
Number of extensions: 711972
Number of successful extensions: 2417
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2412
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -