Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_K12
         (820 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    32   0.57 
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   4.0  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   5.3  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   5.3  

>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -2

Query: 783  SEGSQXXATPXSFXINIGGXXPYASSHPSPXISGTSTRSSNPRFHT-----PTTPDLTSI 619
            +EGS    +  +  ++     P  S  P+P  SG+ST + NP   T      TT ++TS 
Sbjct: 1238 TEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEMTSH 1297

Query: 618  -SNQSPDAV 595
             S Q+P  +
Sbjct: 1298 GSTQTPSTI 1306


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 9/65 (13%)
 Frame = -2

Query: 735 IGGXXP----YASSHPSPXISGTSTRSSNPRFHTPTTPDLTSISNQSPDAV-----LEGV 583
           +GG  P    + +  P P  SG       PR  TP  P L  +  ++P  V     L+G+
Sbjct: 101 MGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKLGGKNPGTVDRGEFLKGI 160

Query: 582 RAGVK 568
           + G K
Sbjct: 161 QGGFK 165


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 677 QPDHQIPDSIHQP-PQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 522
           QP    P     P PQ   P P  P  PY +   P   PPL+S   +A   P+
Sbjct: 44  QPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 653  SIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 489
            S+  PP    P P   +           + P+++EAP+A   PS   + +G SPP
Sbjct: 1173 SVIPPPILPPPPPAGVIGQQRNPIGGARQVPVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 653  SIHQPPQT*HPFPINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 489
            S+  PP    P P   +           + P+++EAP+A   PS   + +G SPP
Sbjct: 1173 SVIPPPILPPPPPAGVIGQQRNPIGGARQVPVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,794,177
Number of Sequences: 27780
Number of extensions: 342580
Number of successful extensions: 1143
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)