Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_K08
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 35 0.067
03_05_0062 + 20370608-20370977,20371062-20371541,20371661-203717... 33 0.36
04_04_1518 - 34129542-34130001,34130567-34130652 30 1.9
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 1.9
12_02_1174 - 26696869-26698191 30 2.5
07_03_1284 + 25463476-25463557,25465088-25465220,25465307-254653... 29 3.3
05_03_0635 - 16446805-16447716 29 3.3
02_05_0814 - 31970558-31971126,31971242-31971413 29 3.3
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534... 29 5.8
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.8
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.8
12_02_1049 + 25681284-25681349,25684409-25684627,25684720-256849... 28 7.6
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 28 7.6
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 7.6
>06_03_1310 + 29238644-29240260
Length = 538
Score = 35.1 bits (77), Expect = 0.067
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 670 KSPIPYTNHPQT*HPFPSIPLTPX*KEFAPGLKPPLSSEAPSAYLTPS-SLGMAKGVSPP 494
+SP+P+ P+ P P P +P P PP SE+P + + PS S + G SPP
Sbjct: 382 RSPLPHHMPPRRTPPTPPPPSSPTPSHLPP--PPPTYSESPKSSMPPSTSPPSSHGASPP 439
>03_05_0062 +
20370608-20370977,20371062-20371541,20371661-20371731,
20371836-20371912,20372076-20372223,20372346-20372507,
20372743-20372940
Length = 501
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = -1
Query: 728 PXXIXPPXPGDXGYINPDHQIPDSIHQPPPDLTSISINPPDAVXEGVRAGVKASVVIRG 552
P PP PG I P Q PPD T+ PP A G G S ++ G
Sbjct: 20 PPIQPPPPPGGNSMIMPSSLTTAGTSQSPPDATTAGAPPPPAPSVGAWGGNVPSGLLIG 78
>04_04_1518 - 34129542-34130001,34130567-34130652
Length = 181
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 667 SPIPYTNHPQT*HPFPSIPLTPX*K--EFAPGLKPPLSSEAPSAYLTPSSLG 518
SP P +HP P SIP P + GL PP S+ +PS L+ + LG
Sbjct: 106 SPSPRRHHPHQASPLVSIPTRPPCRIPHRGQGL-PPASTTSPSPSLSLNPLG 156
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 661 IPYTNHPQT*HPFPSIPLTPX*KEFAPGLKPPLSSEAPSAYLT--PSSLGMAKGVSPP 494
+P + P P P P P APG P S P+ Y T P G G PP
Sbjct: 147 MPPGSMPMQMAPLPRPPTLPPPTSGAPGAPIPNSGAPPAMYQTNPPQPAGPTSGAPPP 204
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 737 AVXPXXIXPPXPGDXGYINPDHQIPDSIHQPPPDLTSISINPP 609
A+ P PP P + P H+ P QPPP L PP
Sbjct: 118 ALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPP 160
>07_03_1284 +
25463476-25463557,25465088-25465220,25465307-25465378,
25465476-25465544,25465629-25465700,25465792-25465860,
25466155-25466220,25466299-25466364,25466452-25466786,
25466931-25467214,25467796-25468067,25468152-25468287,
25468625-25468755,25468890-25469046,25469185-25469327,
25470105-25470190,25471530-25472962,25474563-25474712,
25475221-25475322,25475467-25475568
Length = 1319
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = -1
Query: 713 PPXPGDXGYINPDHQIPDSIHQPPPDLTSISINPPD------AVXEGVRAGVKASVVIRG 552
PP Y +P ++ P S QP P T+++ NP D + G AG+ +V+ G
Sbjct: 224 PPPYQSPPYKSPPYKSPQS-RQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVG 282
Query: 551 SI 546
+I
Sbjct: 283 AI 284
>05_03_0635 - 16446805-16447716
Length = 303
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 728 PXXIXPPXPGDXGYINPDHQIPDSIHQPPPDL-TSISINPPDAVXEGVRAGVKASVVIRG 552
P PP P + P + PPPD TS+S++PP A A + AS V+ G
Sbjct: 173 PVLPPPPPPAKRLCVAPPTGVEH--RAPPPDPPTSLSLSPPGA----AAAAISASTVVGG 226
Query: 551 S 549
S
Sbjct: 227 S 227
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2
Query: 709 PXXAXSGTSTXIIKSPIPYTNHPQT*HPFPSIPLTPX*KEFAPGLKPPLSSEAPSAYLTP 530
P ST +P P T P T P+PS P+T + P S A + +TP
Sbjct: 150 PTPTTPNPSTPTPTTPYPSTPMPTT--PYPSTPMTTPTTPYTTPTSPACSGGAGATPVTP 207
Query: 529 SSLG 518
+ G
Sbjct: 208 VTPG 211
>09_04_0741 -
19852339-19852497,19853185-19853246,19853352-19853415,
19853561-19853614,19853744-19853890,19854460-19854564,
19854651-19854794,19854987-19855093,19855613-19855712,
19855804-19855833,19856492-19856608,19856705-19856828,
19857143-19857189,19857272-19857400,19857777-19857852,
19858446-19858543,19858630-19858671,19858811-19859044
Length = 612
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 686 INPDHQIPDSIHQPPPDLTSISINPPDAVXE-GVRAGVKASVVIRGSISVS 537
I+ D Q P +HQ P L +I PPD V E ++ S + G + VS
Sbjct: 223 ISLDKQGPTVVHQKPSHLQTIFGLPPDEVVEHSYSCALERSFLYHGRMYVS 273
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 76 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 222
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 243 PPFDTVLYDNIRTVLKDNKTALLSTSIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 64
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 63 ILHSF 49
+LHSF
Sbjct: 1408 LLHSF 1412
>12_02_1049 +
25681284-25681349,25684409-25684627,25684720-25684980,
25685060-25685362
Length = 282
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 689 YINPDHQIPDSIHQPPPDLT---SISINPPDAVXEGVRAGVKASVVIRGSISVS 537
YI IP+ PP++ S +N P + + +R GV ++RG + V+
Sbjct: 48 YIVKKIPIPERNFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVN 101
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 689 YINPDHQIPDSIHQPPPDLT---SISINPPDAVXEGVRAGVKASVVIRGSISVS 537
YI IP+ PP++ S +N P + + +R GV ++RG + V+
Sbjct: 258 YIVKKIPIPERNFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVN 311
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/87 (26%), Positives = 30/87 (34%)
Frame = -2
Query: 709 PXXAXSGTSTXIIKSPIPYTNHPQT*HPFPSIPLTPX*KEFAPGLKPPLSSEAPSAYLTP 530
P GT S P P P P P P P PP+ AP
Sbjct: 332 PTLVTGGTQENNATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPK 391
Query: 529 SSLGMAKGVSPPYFQVNDESQASRLIS 449
+++ +SP ++ES AS L S
Sbjct: 392 ATMARFPKLSPTESSRSEESSASELAS 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,189,738
Number of Sequences: 37544
Number of extensions: 456959
Number of successful extensions: 1489
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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