Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_K07
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF363480-1|ABM69287.1|  235|Homo sapiens tongue cancer chemother...    33   1.2  
D87470-1|BAA13408.1|  291|Homo sapiens KIAA0280 protein.               33   1.2  
BC052341-1|AAH52341.1|  235|Homo sapiens KIAA0280 protein.             33   1.2  

>EF363480-1|ABM69287.1|  235|Homo sapiens tongue cancer chemotherapy
           resistance-associated protein 1 variant 2 protein.
          Length = 235

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +1

Query: 448 KKNFNTSSVSCATRGRAHL------NNDAYLAG*SLVRYRKLTRQIAPPTXNGHAPPP 603
           K+ +  +S SC T G  HL       N  Y A  +  RY   T    PPT +  APPP
Sbjct: 56  KQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 113


>D87470-1|BAA13408.1|  291|Homo sapiens KIAA0280 protein.
          Length = 291

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +1

Query: 448 KKNFNTSSVSCATRGRAHL------NNDAYLAG*SLVRYRKLTRQIAPPTXNGHAPPP 603
           K+ +  +S SC T G  HL       N  Y A  +  RY   T    PPT +  APPP
Sbjct: 112 KQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 169


>BC052341-1|AAH52341.1|  235|Homo sapiens KIAA0280 protein.
          Length = 235

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +1

Query: 448 KKNFNTSSVSCATRGRAHL------NNDAYLAG*SLVRYRKLTRQIAPPTXNGHAPPP 603
           K+ +  +S SC T G  HL       N  Y A  +  RY   T    PPT +  APPP
Sbjct: 56  KQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,582,560
Number of Sequences: 237096
Number of extensions: 3234978
Number of successful extensions: 6590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6590
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)