Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_K06
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 230 1e-60
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 230 1e-60
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 230 1e-60
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 230 1e-60
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 230 1e-60
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 230 1e-60
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 230 1e-60
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 230 1e-60
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 230 1e-60
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 224 7e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 219 3e-57
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 122 4e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 8e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 53 2e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.74
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.74
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.74
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 209 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 268
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 269 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 328
Query: 346 RKCF 335
RKCF
Sbjct: 329 RKCF 332
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 197 YELPDGQVITVGNERFRCPEALFQPSFLGMES 228
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 239 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 298
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 299 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 358
Query: 346 RKCF 335
RKCF
Sbjct: 359 RKCF 362
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 227 YELPDGQVITVGNERFRCPEALFQPSFLGMES 258
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 230 bits (562), Expect = 1e-60
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 346 RKCF 335
RKCF
Sbjct: 373 RKCF 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 224 bits (547), Expect = 7e-59
Identities = 107/124 (86%), Positives = 109/124 (87%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G ES IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 371
Query: 346 RKCF 335
RKCF
Sbjct: 372 RKCF 375
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMKA 646
YE PDGQVI + + RCPEA FQPSFLGM++
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 219 bits (534), Expect = 3e-57
Identities = 104/124 (83%), Positives = 106/124 (85%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
NERF P F G E IHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIAD
Sbjct: 252 NERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIAD 311
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
RMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 312 RMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 371
Query: 346 RKCF 335
RKCF
Sbjct: 372 RKCF 375
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMK 649
YE PDGQVI I + RCPE FQP+F+GM+
Sbjct: 240 YELPDGQVITIGNERFRCPEVLFQPAFIGME 270
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 122 bits (293), Expect = 4e-28
Identities = 57/124 (45%), Positives = 79/124 (63%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
N F P F + G E + SIMKCDVD+R+ LY+N VLSGGTT++ G D
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGD 310
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 347
R+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H
Sbjct: 311 RLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMH 370
Query: 346 RKCF 335
++ F
Sbjct: 371 KRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (256), Expect = 1e-23
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -1
Query: 604 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 434
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 433 GSILASLXTFQQMWISKQEYDESGPSIVHRKC 338
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Frame = -1
Query: 703 ERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 524
ERF P F + E + E + I D+D R D Y + VLSGGTTMYPG+ R
Sbjct: 257 ERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSR 316
Query: 523 MQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--XTFQQMWISK 383
++KE+ L A KI+I APP RK+ V++GG++LA+L Q W+SK
Sbjct: 317 LEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSK 376
Query: 382 QEYDESG 362
+EY+E G
Sbjct: 377 KEYEEGG 383
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 741 YEXPDGQVIXIXTKDSRCPEAXFQPSFLGMK 649
Y PDG+VI + + PE FQP + ++
Sbjct: 244 YTLPDGRVIRLGGERFEAPEILFQPHLINVE 274
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/110 (31%), Positives = 67/110 (60%)
Frame = -1
Query: 706 NERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 527
N RF G F +G ++ +H+ + +I++C +D R+ LY N L+GG ++ PGIA+
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAE 489
Query: 526 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQE 377
++++E++ + P+T+ ++ P R + ++G I+AS TF+ IS Q+
Sbjct: 490 KLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 74.5 bits (175), Expect = 8e-14
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 16/112 (14%)
Frame = -1
Query: 640 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA------------ 497
I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSG 362
Query: 496 ----PSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 353
P + +++I+ ++Y+VW GGS+LAS F Q+ +K EY E GPSI
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = -1
Query: 703 ERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 524
ERF +P F + + E SI +C +R L N ++ GG++ +PG +R
Sbjct: 268 ERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRER 327
Query: 523 MQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 353
+++E+ ++ P+ + + + P+ W G L L + WI+++++DE G S+
Sbjct: 328 LEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
Query: 352 VHRKCF*T 329
F T
Sbjct: 384 EFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = -1
Query: 703 ERFPLPRGXFPTXVFGYESXRIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 524
ERF +P F + + E SI +C +R L N ++ GG++ +PG +R
Sbjct: 268 ERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRER 327
Query: 523 MQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 353
+++E+ ++ P+ + + + P+ W G L L + WI+++++DE G S+
Sbjct: 328 LEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
Query: 352 VHRKCF*T 329
F T
Sbjct: 384 EFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 616 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 452
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 451 ----YSVWIGGSILASL-XTFQQMWISKQEY 374
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 440 PYGVLPLWRSNDLNLHCRWGESCD 511
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 440 PYGVLPLWRSNDLNLHCRWGESCD 511
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 440 PYGVLPLWRSNDLNLHCRWGESCD 511
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 276 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 368
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 379 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 278
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 276 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 368
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,784,486
Number of Sequences: 27780
Number of extensions: 284659
Number of successful extensions: 640
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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