Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_K05
(821 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 315 5e-86
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 315 5e-86
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 315 5e-86
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 315 5e-86
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 310 1e-84
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 315 bits (773), Expect = 5e-86
Identities = 145/173 (83%), Positives = 154/173 (89%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATITPA 103
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG EDK KWA H KP QDEMIDC+GVTKGKG+KGV W
Sbjct: 176 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 315 bits (773), Expect = 5e-86
Identities = 145/173 (83%), Positives = 154/173 (89%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATITPA 103
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG EDK KWA H KP QDEMIDC+GVTKGKG+KGV W
Sbjct: 163 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 222
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 223 HTKKLPRKTH 232
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 315 bits (773), Expect = 5e-86
Identities = 145/173 (83%), Positives = 154/173 (89%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATITPA 103
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG EDK KWA H KP QDEMIDC+GVTKGKG+KGV W
Sbjct: 163 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 222
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 223 HTKKLPRKTH 232
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 315 bits (773), Expect = 5e-86
Identities = 145/173 (83%), Positives = 154/173 (89%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATITPA 103
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG EDK KWA H KP QDEMIDC+GVTKGKG+KGV W
Sbjct: 176 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 310 bits (762), Expect = 1e-84
Identities = 142/167 (85%), Positives = 151/167 (90%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 306
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 307 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 366
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 367 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG EDK KWA H KP QDEMIDC+GVTKGKG+KGV W
Sbjct: 187 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 246
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 247 HTKKLPRKTH 256
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,740,497
Number of Sequences: 53049
Number of extensions: 725723
Number of successful extensions: 1896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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