Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_K05
(821 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 241 3e-64
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 241 3e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 241 3e-64
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 241 3e-64
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 241 3e-64
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 241 3e-64
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 197
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 198 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 254
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 255 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 78 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 138 HTKKLPRKTH 147
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -1
Query: 695 AQDEMIDCIGVTKGKGYKGVIFXWHTKEVTPVRH 594
A +MID IGVT+G G+KGV WHTK++ H
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 197
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 197
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 198 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 254
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 255 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 78 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 138 HTKKLPRKTH 147
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -1
Query: 695 AQDEMIDCIGVTKGKGYKGVIFXWHTKEVTPVRH 594
A +MID IGVT+G G+KGV WHTK++ H
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 197
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 241 bits (591), Expect = 3e-64
Identities = 112/167 (67%), Positives = 133/167 (79%)
Frame = -3
Query: 621 HKRSYPRKTHKXFRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 442
H + PRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 295
Query: 441 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 262
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 296 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 352
Query: 261 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 121
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 353 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/70 (48%), Positives = 38/70 (54%)
Frame = -1
Query: 803 KKXHXXXIQXXGGPXEDKXKWAXXHXXKPFPXRXWXAQDEMIDCIGVTKGKGYKGVIFXW 624
KK H IQ GG E K WA H K AQDEMID IGVT+G G+KGV W
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 623 HTKEVTPVRH 594
HTK++ H
Sbjct: 236 HTKKLPRKTH 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,030,832
Number of Sequences: 27780
Number of extensions: 367777
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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