Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_K04
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC120960-1|AAI20961.1|  282|Homo sapiens keratin associated prot...    32   2.6  
BC120959-1|AAI20960.1|  282|Homo sapiens keratin associated prot...    32   2.6  
U76456-1|AAB40391.1|  224|Homo sapiens tissue inhibitor of metal...    31   4.6  
BT019627-1|AAV38433.1|  224|Homo sapiens tissue inhibitor of met...    31   4.6  
BC010553-1|AAH10553.1|  224|Homo sapiens TIMP metallopeptidase i...    31   4.6  
AF057532-1|AAC34422.1|  224|Homo sapiens tissue inhibitor of met...    31   4.6  
D63586-1|BAA24408.1|   70|Homo sapiens MHC ClassII HLA-DR-beta 1...    31   6.1  
AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated prot...    30   8.0  

>BC120960-1|AAI20961.1|  282|Homo sapiens keratin associated protein
           10-1 protein.
          Length = 282

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -1

Query: 639 CCLGNCRLYPKLKFGRKVSSRRSTTACTGRCRQ---RDGCSS*TWTKSCCRTASARSWRC 469
           C L  C L P L       SR S+  C   C     + GC+S + T SCC+ +S +   C
Sbjct: 32  CALSCCALAPCLTLVCTPVSRVSSPCCQAACEPSPCQSGCTS-SCTPSCCQQSSCQPACC 90


>BC120959-1|AAI20960.1|  282|Homo sapiens keratin associated protein
           10-1 protein.
          Length = 282

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -1

Query: 639 CCLGNCRLYPKLKFGRKVSSRRSTTACTGRCRQ---RDGCSS*TWTKSCCRTASARSWRC 469
           C L  C L P L       SR S+  C   C     + GC+S + T SCC+ +S +   C
Sbjct: 32  CALSCCALAPCLTLVCTPVSRVSSPCCQAACEPSPCQSGCTS-SCTPSCCQQSSCQPACC 90


>U76456-1|AAB40391.1|  224|Homo sapiens tissue inhibitor of
           metalloproteinase 4 protein.
          Length = 224

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 196 ALLHHYRITCEFGGMNCLTVPSTVDRTAH-RWTDELQQR 83
           +L HHY + C      C TVP T+       WTD L +R
Sbjct: 147 SLNHHYHLNCGCQITTCYTVPCTISAPNECLWTDWLLER 185


>BT019627-1|AAV38433.1|  224|Homo sapiens tissue inhibitor of
           metalloproteinase 4 protein.
          Length = 224

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 196 ALLHHYRITCEFGGMNCLTVPSTVDRTAH-RWTDELQQR 83
           +L HHY + C      C TVP T+       WTD L +R
Sbjct: 147 SLNHHYHLNCGCQITTCYTVPCTISAPNECLWTDWLLER 185


>BC010553-1|AAH10553.1|  224|Homo sapiens TIMP metallopeptidase
           inhibitor 4 protein.
          Length = 224

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 196 ALLHHYRITCEFGGMNCLTVPSTVDRTAH-RWTDELQQR 83
           +L HHY + C      C TVP T+       WTD L +R
Sbjct: 147 SLNHHYHLNCGCQITTCYTVPCTISAPNECLWTDWLLER 185


>AF057532-1|AAC34422.1|  224|Homo sapiens tissue inhibitor of
           metalloproteinase 4 protein.
          Length = 224

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 196 ALLHHYRITCEFGGMNCLTVPSTVDRTAH-RWTDELQQR 83
           +L HHY + C      C TVP T+       WTD L +R
Sbjct: 147 SLNHHYHLNCGCQITTCYTVPCTISAPNECLWTDWLLER 185


>D63586-1|BAA24408.1|   70|Homo sapiens MHC ClassII HLA-DR-beta 1
           chain protein.
          Length = 70

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 46  GRRWLSFSSRCLSSVGARRSTGARCGPRWTGPSDSS 153
           GRR  S+    LS+  ARR++ +R GPRWT  +D++
Sbjct: 33  GRR-RSWGGLTLSTGTARRTSWSRRGPRWTPTADTT 67


>AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated protein
           protein.
          Length = 365

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
 Frame = -1

Query: 684 VGVCSTTTGNRXLSLCCL-GNCRLYPKLKFGRKVSSRRSTTACTGR---CRQRDGCSS*T 517
           V VC   T +   S CC   +C+  P                C+G    C Q+  C    
Sbjct: 235 VPVCCVPTCSEDSSSCCQQSSCQ--PACCTSSPCQHACCVPVCSGASTSCCQQSSCQPAC 292

Query: 516 WTKSCCRTASARSWRC 469
            T SCCR++S+ S  C
Sbjct: 293 CTASCCRSSSSVSLLC 308


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,913,184
Number of Sequences: 237096
Number of extensions: 2215781
Number of successful extensions: 7837
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7783
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)