Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_J18
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95090-1|AAB80768.1|  826|Homo sapiens F19541_1 protein.               31   4.2  
U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.                   30   9.8  
BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.         30   9.8  
BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3...    30   9.8  
BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3...    30   9.8  

>U95090-1|AAB80768.1|  826|Homo sapiens F19541_1 protein.
          Length = 826

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 821 QWSFFGTKSTXLPKCRNNSAPLTQMAGRRVRWEVYISRA 705
           QW +FG+     P  R++ A  +++AG    WE  +SR+
Sbjct: 229 QWRYFGSLHPLPPGSRDSLASASRIAGITAPWEAEVSRS 267


>U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +3

Query: 51  PSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQHGFG 230
           P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    H   
Sbjct: 265 PNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVDHNTK 324

Query: 231 QCVEQRPLVP 260
               +RPL P
Sbjct: 325 TTTWERPLPP 334


>BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +3

Query: 51  PSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQHGFG 230
           P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    H   
Sbjct: 265 PNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVDHNTK 324

Query: 231 QCVEQRPLVP 260
               +RPL P
Sbjct: 325 TTTWERPLPP 334


>BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 870

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +3

Query: 51  PSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQHGFG 230
           P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    H   
Sbjct: 265 PNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVDHNTK 324

Query: 231 QCVEQRPLVP 260
               +RPL P
Sbjct: 325 TTTWERPLPP 334


>BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 335

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +3

Query: 51  PSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQHGFG 230
           P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    H   
Sbjct: 265 PNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVDHNTK 324

Query: 231 QCVEQRPLVP 260
               +RPL P
Sbjct: 325 TTTWERPLPP 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,327,999
Number of Sequences: 237096
Number of extensions: 2874783
Number of successful extensions: 5505
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5505
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)