Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_J09
         (1222 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       31   1.8  
07_01_0080 + 587674-588510                                             29   5.6  
01_01_0083 + 631196-631675                                             29   5.6  
09_02_0495 + 9880714-9881196                                           29   7.4  
06_03_0743 + 24069752-24070483,24071890-24072345                       29   7.4  
02_05_0002 - 24849189-24849825,24850267-24850328                       29   7.4  
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254...    29   9.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   9.8  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 840 GGGGXFXFXXPPPPXXKKKGGXFFFFXXPPP 932
           GGGG   +  PPPP        F+++  PPP
Sbjct: 130 GGGGGGAYPTPPPPNPFLPYFPFYYYSPPPP 160


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +3

Query: 840 GGGGXFXFXXPPPPXXKKKGGXFFFFXXPPPPP 938
           GG G F    PPPP     G        PPPPP
Sbjct: 83  GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPP 115


>01_01_0083 + 631196-631675
          Length = 159

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 837 GGGGGXFXFXXPPPPXXKKKGGXFFFFXXPPPP 935
           GGGGG   +  PP       GG  F +  PPPP
Sbjct: 82  GGGGGYIPYYQPPAGGG--GGGGGFNYPAPPPP 112


>09_02_0495 + 9880714-9881196
          Length = 160

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 6/40 (15%)
 Frame = +3

Query: 837 GGGGGXFXFXXPPPPXXKKKG------GXFFFFXXPPPPP 938
           GG GG F    PPPP     G      G  F +   PPPP
Sbjct: 69  GGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPP 108


>06_03_0743 + 24069752-24070483,24071890-24072345
          Length = 395

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 870 PPPPXXKKKGGXFFFFXXPPPPP 938
           PPPP      G +  +  PPPPP
Sbjct: 31  PPPPYAASFSGLYSSYLHPPPPP 53


>02_05_0002 - 24849189-24849825,24850267-24850328
          Length = 232

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 918 KKKKXXPLFFFXXGGGGXKKXTXPPPPP 835
           KKK+  P      GGGG      PPPPP
Sbjct: 198 KKKRKKPQPADTSGGGGHPHPPPPPPPP 225


>08_02_1569 -
           27924930-27925034,27925149-27925167,27925271-27925490,
           27925925-27925971,27926502-27927025
          Length = 304

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 888 FXXGGGGXKKXTXPPPPP 835
           +  GGGG    T PPPPP
Sbjct: 43  YGHGGGGYPSSTYPPPPP 60


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = -2

Query: 861 KXTXPPPPPXXXXXXXXXXXXXPPPXKKXXXXXGGPXPXXKK 736
           K   PPPPP             PPP  K       P P  KK
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,720,132
Number of Sequences: 37544
Number of extensions: 527994
Number of successful extensions: 2255
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)