Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_J09
         (1222 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p pro...    31   3.2  
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    31   3.2  
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB...    31   3.2  

>AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p
           protein.
          Length = 877

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/63 (30%), Positives = 22/63 (34%)
 Frame = -2

Query: 936 GGGGGXKKKKXXPLFFFXXGGGGXKKXTXPPPPPXXXXXXXXXXXXXPPPXKKXXXXXGG 757
           G GGG       P  +   GGGG       PPPP             PPP ++     GG
Sbjct: 140 GTGGGPGPGPGPPPHYGGGGGGGGHMGMRGPPPP--APHLRGMPPGGPPPTQQPGGAGGG 197

Query: 756 PXP 748
             P
Sbjct: 198 GGP 200


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
            isoform A protein.
          Length = 2061

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/63 (30%), Positives = 22/63 (34%)
 Frame = -2

Query: 936  GGGGGXKKKKXXPLFFFXXGGGGXKKXTXPPPPPXXXXXXXXXXXXXPPPXKKXXXXXGG 757
            G GGG       P  +   GGGG       PPPP             PPP ++     GG
Sbjct: 1324 GTGGGPGPGPGPPPHYGGGGGGGGHMGMRGPPPP--APHLRGMPPGGPPPTQQPGGAGGG 1381

Query: 756  PXP 748
              P
Sbjct: 1382 GGP 1384


>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
            isoform B protein.
          Length = 2103

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 19/63 (30%), Positives = 22/63 (34%)
 Frame = -2

Query: 936  GGGGGXKKKKXXPLFFFXXGGGGXKKXTXPPPPPXXXXXXXXXXXXXPPPXKKXXXXXGG 757
            G GGG       P  +   GGGG       PPPP             PPP ++     GG
Sbjct: 1366 GTGGGPGPGPGPPPHYGGGGGGGGHMGMRGPPPP--APHLRGMPPGGPPPTQQPGGAGGG 1423

Query: 756  PXP 748
              P
Sbjct: 1424 GGP 1426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,583,642
Number of Sequences: 53049
Number of extensions: 729931
Number of successful extensions: 1892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6499020495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)