Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_J07
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical...    28   6.8  
AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 576 FPDVAVRETAAKLLNEMSDDDLCRVLPQLTQALRHETY 463
           +PD  +R  A + L   S D L   +PQ  +ALR E Y
Sbjct: 865 YPDERIRAHAVQSLARGSTDFLYHTIPQFIEALRFELY 902


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 576 FPDVAVRETAAKLLNEMSDDDLCRVLPQLTQALRHETY 463
           +PD  +R  A + L   S D L   +PQ  +ALR E Y
Sbjct: 865 YPDERIRAHAVQSLARGSTDFLYHTIPQFIEALRFELY 902


>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
            protein Y75B8A.24 protein.
          Length = 2121

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 549  AAKLLNEMSDDDLCRVLPQLTQALRHET 466
            A ++L   S D+L   +PQ+ QA+R++T
Sbjct: 1651 AVRVLRSYSADELLLYIPQIVQAVRYDT 1678


>AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical
           protein C41D11.6 protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 369 PNIPQAPHQEFLGINLEDNASENAETDASMSASWRYTLMLR 247
           PN+P  P Q  + INL +N  +N +    +  + R+  M R
Sbjct: 72  PNVPILPPQNQIPINLNNNNHDNEQERERVPNNMRFLRMQR 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,267,186
Number of Sequences: 27780
Number of extensions: 175718
Number of successful extensions: 477
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)