Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_I03
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 142 7e-35
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 4e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 105 1e-23
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 50 3e-07
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 50 4e-07
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 33 0.062
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 30 0.33
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 30 0.33
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.33
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 29 0.58
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.0
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 3.1
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.1
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.1
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.1
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 4.1
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 4.1
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 5.4
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.4
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 26 7.2
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 7.2
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.2
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.2
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.5
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 9.5
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.5
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 142 bits (343), Expect = 7e-35
Identities = 73/170 (42%), Positives = 97/170 (57%)
Frame = -1
Query: 741 FEGXRVMTKENNLAR*IRXTGIXXAPRGVXQLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
FEG R TK+ NL +GI APRGV Q+
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKIT 500
Query: 561 XXXTKVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 382
K SKEEI+RMV+E EKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 381 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 232
SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 561 DASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 767 NQPXVLIQVLRXXXL*PKKTTWLGKFEXPG 678
NQP VLIQV K LGKFE G
Sbjct: 432 NQPGVLIQVFEGERARTKDCNLLGKFELSG 461
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (337), Expect = 4e-34
Identities = 72/170 (42%), Positives = 97/170 (57%)
Frame = -1
Query: 741 FEGXRVMTKENNLAR*IRXTGIXXAPRGVXQLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
FEG R TK+ NL +GI APRGV Q+
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKIT 500
Query: 561 XXXTKVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 382
K SKEEI+RMV E EKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 381 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 232
SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 561 DASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 767 NQPXVLIQVLRXXXL*PKKTTWLGKFEXPG 678
NQP VLIQV K LGKFE G
Sbjct: 432 NQPGVLIQVFEGERARTKDCNLLGKFELSG 461
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 105 bits (251), Expect = 1e-23
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Frame = -1
Query: 741 FEGXRVMTKENNLAR*IRXTGIXXAPRGVXQLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
+EG R +TK+NNL GI APRGV Q+
Sbjct: 470 YEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKL 529
Query: 561 XXXT-KVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKE 388
K S+E+IERMV E E++ ED KE I+A+N LE+Y +S+K +DE+L
Sbjct: 530 VIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGG 589
Query: 387 KISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNPIITKMY 235
K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 590 KVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -3
Query: 676 PPGAAXXASIEVTXDIDANGIXNVSAIEKS-TNKENKITITNDKGR 542
PP IEVT ++DANG+ VSA++KS K K+ I NDKGR
Sbjct: 492 PPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGR 537
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 50.4 bits (115), Expect = 3e-07
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Frame = -1
Query: 741 FEGXRVMTKENNLAR*IRXTGIXXAPRGVXQLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
F+G R + ++N L + TGI AP+G Q+
Sbjct: 484 FQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSIT 543
Query: 561 XXXTKVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKE 388
+ + + EIE MV + EKYR D +KE I+ N ES C ++S ++ +KL +
Sbjct: 544 VAGSSGL-TDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQ 602
Query: 387 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 232
+ + + I D K ++ E+ + K E++ + + +Y+
Sbjct: 603 QAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
Score = 46.0 bits (104), Expect = 6e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -3
Query: 673 PGAAXXASIEVTXDIDANGIXNVSAIEKSTNKENKITITNDKG 545
P IEV+ D+DA+GI NVSA +K+TNK++ IT+ G
Sbjct: 507 PAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG 549
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 50.0 bits (114), Expect = 4e-07
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 3/152 (1%)
Frame = -1
Query: 762 TXGTHPSFEGXRVMTKENNLAR*IRXTGIXXAPRGVXQLRXXXXXXXXXXXXXXXXXXXX 583
T T P ++G RV EN + TGI PRG +L
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Query: 582 XXXXXXXXXXTKVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 403
+ S +I+ M+ +K++ +D + ++AK+ LESY ++++T+ +
Sbjct: 499 GRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISE 558
Query: 402 EKLKEKISDSDKQTI---LDKCNDTIKWLDSN 316
+ K+ DK I L +C ++ D+N
Sbjct: 559 PNVMMKLKRGDKSKIEAQLAECMSQLELEDTN 590
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = -3
Query: 676 PPGAAXXASIEVTXDIDANGIXNVSAIEKSTNKENKITITNDKG 545
PP A +E T ++DANGI V+A+EK+T + I ITN G
Sbjct: 468 PPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVG 511
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 32.7 bits (71), Expect = 0.062
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -1
Query: 546 VVFSKEEIERMVNEXEKYRNEDD-KQKETIQAKNALESYCFS-----MKSTMEDEKLKEK 385
V ++ E +NE +K+ +E+D T +N S S + +E + K
Sbjct: 213 VYYTLENDSENINEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKIN 272
Query: 384 ISDSD-KQTILDKCNDTIKWLDSNQLADKEEYEHKQK 277
+D+D KQ + D + KW + ++ +E YE +K
Sbjct: 273 ATDADVKQLLSDVKKNKSKWANDQRIGQEELYEAAEK 309
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = -1
Query: 531 EEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 352
EE++ +NE +K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 351 K 349
K
Sbjct: 79 K 79
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 30.3 bits (65), Expect = 0.33
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -1
Query: 528 EIERMVNEXEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EKLKEKISDSDKQTI 358
E+ E E DK ET+ KNALE Y + ++ ++D + S + +
Sbjct: 554 EVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEM 613
Query: 357 LDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 250
L K D WL + + K Y K ++L + PI
Sbjct: 614 LTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.33
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -1
Query: 537 SKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 358
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 357 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 268
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 29.5 bits (63), Expect = 0.58
Identities = 17/91 (18%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = -1
Query: 546 VVFSKEEIERMVNEXEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSD 370
+ ++ +++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE +
Sbjct: 486 IEYTDQKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQ 544
Query: 369 KQTILDKCNDTIKWLDSNQLADKEEYEHKQK 277
+ + + + + D + + K+K
Sbjct: 545 NENQHKRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 393 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 268
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 510 NEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 331
N+ E + DDKQ + KN+LE+ M+ + E K D ++ LDK D K
Sbjct: 1272 NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -1
Query: 522 ERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC- 346
E + EK ++ K + KNA ++ M DE+ E S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 345 NDTIKWLDSNQLADKEEYEHKQKE 274
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 516 MVNEXEKYRNEDDKQKETIQAKNALESYCFSMKST 412
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 4.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -1
Query: 534 KEEIERMVNEXEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 382
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 381 SDSDKQTILDKCND 340
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 531 EEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 361
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -1
Query: 486 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 325
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.6 bits (56), Expect = 4.1
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -1
Query: 549 KVVFSKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 370
K + S I V + E+ + D T+Q K +S FS K + E L +KIS+ D
Sbjct: 390 KALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEID 444
Query: 369 KQTILDKC 346
QT ++C
Sbjct: 445 SQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 537 SKEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKS 415
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -1
Query: 513 VNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 334
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 333 KWLDSNQLADKEEYEHKQKELEGICNPI 250
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 224 EESPEVCRASRAEHPEPE 171
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 772 FETNPGYSSKF*GXAXYDQRKQLGSVNSXDRDPPGAAXXASIE 644
F + G F G Y + K G V S DPPG+ + I+
Sbjct: 185 FTCSTGTGGTFAGVTKYLKEKSDGRVASFVADPPGSVLYSHIK 227
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 7.2
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = -1
Query: 531 EEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 352
E+ + E EK + +A+ A + +E EK KEK D D++
Sbjct: 230 EDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQE---- 285
Query: 351 KCNDTIKWLDSNQLADKEEYEHKQKELE 268
DT+ D NQ+ +E E QKE++
Sbjct: 286 --QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 489 FCTSLXH*PYARSLPWRXRPLSLVMVILFSLLV 587
F T L P+ + W P L++V++FS+LV
Sbjct: 636 FLTKLYTFPFT-IITWLMHPTHLLLVVMFSMLV 667
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 483 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 307
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 306 DK 301
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -1
Query: 534 KEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 355
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 354 D 352
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -1
Query: 534 KEEIERMVNEXEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 355
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 354 DKC 346
D C
Sbjct: 754 DGC 756
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 213 RGLLRHPGTSSLLSDCKCLPILSA-CAH 293
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 453 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 328
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,457,452
Number of Sequences: 5004
Number of extensions: 44340
Number of successful extensions: 230
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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