Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_I01
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83127-2|CAB05632.2|  252|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    28   7.8  

>Z83127-2|CAB05632.2|  252|Caenorhabditis elegans Hypothetical
           protein T23F6.2 protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 742 AFTVGGXYKQSSFSEPSDRLETPI---QRCFDLHRR 644
           AFTVGG Y  S   E S  ++ PI      FDL+ R
Sbjct: 142 AFTVGGEYDPSKIREVSGSMDLPIPGVNELFDLNGR 177


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
           beta protein.
          Length = 1418

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 191 PRADDDWRSFSDREMPAASGRRCAPTASTMAPCARAAG 78
           P A  D R+  + E P +S     P+ S   PCA ++G
Sbjct: 634 PLAAGDQRAHPEVEQPVSSSSPATPSISGPPPCATSSG 671


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,429,550
Number of Sequences: 27780
Number of extensions: 341027
Number of successful extensions: 914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)