BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_H19
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 42 0.003
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 42 0.003
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 42 0.003
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 40 0.011
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 40 0.011
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 40 0.011
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 40 0.011
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 40 0.011
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 40 0.011
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 40 0.011
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 40 0.011
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 40 0.011
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 40 0.011
L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein. 35 0.30
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR KG RK AC G+WHP R GY R +++IF G G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR KG RK AC G+WHP R GY R +++IF G G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR KG RK AC G+WHP R GY R +++IF G G
Sbjct: 237 KKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 289
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 233 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 285
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 86 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 138
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 209 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 261
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 127 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 179
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 183 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 235
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYGPG 424
K++PR +G RK AC G+WHP R GY R +++I+ G G
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein.
Length = 277
Score = 35.1 bits (77), Expect = 0.30
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 582 KEVPR*KXKGFRKXACNGSWHPFR 511
K++PR +G RK AC G+WHP R
Sbjct: 238 KKLPRKTHRGLRKVACIGAWHPVR 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,298,719
Number of Sequences: 237096
Number of extensions: 1276869
Number of successful extensions: 1148
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -