Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_H19
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...    37   0.015
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...    37   0.015
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...    37   0.015
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...    37   0.015
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...    37   0.015
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen...    29   5.1  
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen...    29   5.1  
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ...    29   5.1  
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ...    29   5.1  
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll...    29   5.1  

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 582 KEVPR*KXKGFRKXACNGSWHPFRXXXXXXXXXXXGYXSRYXXDQEIFXYG 430
           K++PR   KG RK AC G+WHP R           G+  R   + +I+  G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288


>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
            protein.
          Length = 1759

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 657  GKPKIXREXVXPNFPXAHFTLXPNGXPGKFG 749
            G P +  E   P FP A   L  NG PGK G
Sbjct: 1305 GAPGLKGESGMPGFPGAKGDLGANGIPGKRG 1335


>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
            protein.
          Length = 1758

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 657  GKPKIXREXVXPNFPXAHFTLXPNGXPGKFG 749
            G P +  E   P FP A   L  NG PGK G
Sbjct: 1304 GAPGLKGESGMPGFPGAKGDLGANGIPGKRG 1334


>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
            isoform a protein.
          Length = 1758

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 657  GKPKIXREXVXPNFPXAHFTLXPNGXPGKFG 749
            G P +  E   P FP A   L  NG PGK G
Sbjct: 1304 GAPGLKGESGMPGFPGAKGDLGANGIPGKRG 1334


>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
            isoform b protein.
          Length = 1759

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 657  GKPKIXREXVXPNFPXAHFTLXPNGXPGKFG 749
            G P +  E   P FP A   L  NG PGK G
Sbjct: 1305 GAPGLKGESGMPGFPGAKGDLGANGIPGKRG 1335


>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
            protein.
          Length = 1795

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 657  GKPKIXREXVXPNFPXAHFTLXPNGXPGKFG 749
            G P +  E   P FP A   L  NG PGK G
Sbjct: 1341 GAPGLKGESGMPGFPGAKGDLGANGIPGKRG 1371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,514,587
Number of Sequences: 27780
Number of extensions: 149069
Number of successful extensions: 139
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)