Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_H14
(792 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 66 5e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 66 5e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 66 5e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 61 2e-09
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 61 2e-09
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 55 1e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 48 1e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 46 6e-05
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 45 1e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 1e-04
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.8
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 29 9.6
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 29 9.6
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 29 9.6
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 29 9.6
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 29 9.6
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 29 9.6
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 66.1 bits (154), Expect = 5e-11
Identities = 28/88 (31%), Positives = 52/88 (59%)
Frame = -2
Query: 662 LEIR*HXTKTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDD 483
LE + + ++P+ TY S ++ +A+R+++ Q QSR RI GAPW++RN ++H D
Sbjct: 779 LEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRD 838
Query: 482 LDLESISKYLQSASMRHFDKAARHENPL 399
L ++ + + + ++ +K H NPL
Sbjct: 839 LKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 792 VKXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
V LGV LD R+T+ I+ L+ +I RS +SL K LY ++ P
Sbjct: 736 VTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 66.1 bits (154), Expect = 5e-11
Identities = 28/88 (31%), Positives = 52/88 (59%)
Frame = -2
Query: 662 LEIR*HXTKTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDD 483
LE + + ++P+ TY S ++ +A+R+++ Q QSR RI GAPW++RN ++H D
Sbjct: 779 LEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRD 838
Query: 482 LDLESISKYLQSASMRHFDKAARHENPL 399
L ++ + + + ++ +K H NPL
Sbjct: 839 LKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 792 VKXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
V LGV LD R+T+ I+ L+ +I RS +SL K LY ++ P
Sbjct: 736 VTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 66.1 bits (154), Expect = 5e-11
Identities = 36/110 (32%), Positives = 55/110 (50%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K + P Y ++ A +H+K Q IQ++ R+ G WFVRN LH DL L ++
Sbjct: 796 KQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFD 855
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 309
+ S R+ D+ RH N L A P R+ +RR+P+ +I+ P
Sbjct: 856 EINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = -1
Query: 789 KXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
K LGV LD R+TF + +R R + + Y ++ RSK+SL NK+T+Y+ + P
Sbjct: 746 KYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAP 801
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 60.9 bits (141), Expect = 2e-09
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K+ + P + Y V+ AA++HL +I+Q++ R GAPW++R D+ DL + +
Sbjct: 801 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 860
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
LQ+ + ++ ++ H N L G AD R RR +H D P+
Sbjct: 861 KLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 789 KXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
K LG+TLD ++TF I ++ + R+ +I R+K+SL KV +Y+++ P
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 806
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 60.9 bits (141), Expect = 2e-09
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K+ + P + Y V+ AA++HL +I+Q++ R GAPW++R D+ DL + +
Sbjct: 603 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 662
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
LQ+ + ++ ++ H N L G AD R RR +H D P+
Sbjct: 663 KLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 789 KXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
K LG+TLD ++TF I ++ + R+ +I R+K+SL KV +Y+++ P
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 608
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 55.2 bits (127), Expect = 1e-07
Identities = 22/78 (28%), Positives = 43/78 (55%)
Frame = -2
Query: 632 CIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYL 453
C+ P+ Y ++ AA+++ Q++Q+R R P++VR LH DL+L ++ + +
Sbjct: 804 CVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQI 863
Query: 452 QSASMRHFDKAARHENPL 399
+ R+ D+ RH + L
Sbjct: 864 SRHTSRYSDRLRRHHSIL 881
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = -1
Query: 789 KXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
K LG+TLD R+TF P +K R + +L ++ R+S M+LR K +Y + P
Sbjct: 752 KYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAP 807
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/56 (32%), Positives = 37/56 (66%)
Frame = -2
Query: 629 IRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
++P+ TY S ++ +A+ +++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 792 LKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 792 VKXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
V LGV LD R+T+ I+ + + L+ +I S +SL +KV LY ++ P
Sbjct: 738 VTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKP 794
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAH-AARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K + P+ YA ++ + T K Q +++++ R + A + R D+ +++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
+ AS R+ + HENPLI + Y P +R+E S+ R
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAH-AARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K + P+ YA ++ + T K Q +++++ R + A + R D+ +++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
+ AS R+ + HENPLI + Y P +R+E S+ R
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAH-AARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K + P+ YA ++ + T K Q +++++ R + A + R D+ +++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
+ AS R+ + HENPLI + Y P +R+E S+ R
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 46.0 bits (104), Expect = 6e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAH-AARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K + P+ YA ++ + T K Q +++++ R + A + R D+ +++S
Sbjct: 412 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 471
Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
+ AS R+ + HENPLI + Y P +R+E S+ R
Sbjct: 472 ETFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 512
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 45.2 bits (102), Expect = 1e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
KT P++ Y S V+ A+TH+K QI Q++ ++ + P++ LH ++ + +
Sbjct: 821 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
Query: 458 YLQ 450
+Q
Sbjct: 881 KIQ 883
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -1
Query: 792 VKXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
++ LG+ D ++TF I + I+ LYP+I R+SK+S+ NK+ +++ + P
Sbjct: 770 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 826
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 45.2 bits (102), Expect = 1e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = -2
Query: 638 KTCIRPVMTYASVVFAHAARTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
KT P++ Y S V+ A+TH+K QI Q++ ++ + P++ LH ++ + +
Sbjct: 769 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
Query: 458 YLQ 450
+Q
Sbjct: 829 KIQ 831
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -1
Query: 792 VKXLGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
++ LG+ D ++TF I + I+ LYP+I R+SK+S+ NK+ +++ + P
Sbjct: 718 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 774
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGV LDS++T P + V + ++ ++ RSK+ K+ + +++ +P
Sbjct: 684 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 737
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGVTLDS++T + + + +L ++ RSK+ + K+ + +++ +P
Sbjct: 812 LGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSP 865
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGV LDS++T P + V + ++ ++ RSK+ K+ + +++ +P
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGV LDS++T P + V + ++ ++ RSK+ K+ + +++ +P
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGV LDS++T P + V + ++ ++ RSK+ K+ + +++ +P
Sbjct: 762 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 815
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 783 LGVTLDSRITFPPXIKXVRDRAXFILGRLYPMICRRSKMSLRNKVTLYQNLHTP 622
LGV LDS++T P + V + ++ ++ RSK+ K+ + +++ +P
Sbjct: 800 LGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,196,110
Number of Sequences: 53049
Number of extensions: 659265
Number of successful extensions: 1617
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -