Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_H05
(808 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 28 0.12
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 1.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 1.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 1.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 1.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.5
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 3.3
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 5.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.7
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 7.7
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 27.9 bits (59), Expect = 0.12
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RRG HR PSH E+IP
Sbjct: 308 RETSRERSRDRRGRGRSREHRIIPSHYIEQIP 339
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 641 RETKRSAEGCRRG*NAFCPHRR*PSHVAERIP 546
RET + RR HR PSH E+IP
Sbjct: 293 RETSKERSRDRRERGRSREHRIIPSHYIEQIP 324
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 140 LVVLGSDLQQPFRLDISDSPNVVLG 214
LV LG L P R+DI N +LG
Sbjct: 270 LVGLGFSLNGPDRIDILSQINGILG 294
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Frame = +2
Query: 392 FACEFCACSFQIK---SVH 439
+ CE+C+ SF +K SVH
Sbjct: 120 YQCEYCSKSFSVKENLSVH 138
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.7
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3
Query: 767 GAVMAEFPLDPQLAKMXIASCNHNCSNEILF 675
G + +FP D Q + S HN + +L+
Sbjct: 143 GLRLEKFPFDVQECPLIFESWTHNVLDMVLY 173
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 469 DNVRQQLSRIMDRFNLK 419
+NV Q +SRI+D ++++
Sbjct: 35 ENVTQTISRILDGYDIR 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,482
Number of Sequences: 438
Number of extensions: 4110
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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