Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_G22
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 286 2e-77
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 33 0.25
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 32 0.44
02_05_0237 + 27095817-27097433 30 2.3
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 29 4.1
04_03_0272 + 13725262-13725443,13726036-13726114,13726329-137263... 29 5.4
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 5.4
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 28 7.1
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 28 7.1
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 9.4
08_01_0346 - 3063440-3064189 28 9.4
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 9.4
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 28 9.4
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 9.4
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 286 bits (701), Expect = 2e-77
Identities = 140/171 (81%), Positives = 151/171 (88%)
Frame = -1
Query: 766 KXKFVGDGFFKAELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 587
K KFV DG F AELNE L RELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGRRIR
Sbjct: 10 KRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 69
Query: 586 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 407
ELTSVVQKRFN PE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRF+M
Sbjct: 70 ELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVM 129
Query: 406 ESGARGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPCNDYVNTATRHVLLR 254
ESGA+GCEV+VSGKLR QRAKSM+F DG MI SG P N Y+++A RHVLLR
Sbjct: 130 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLR 180
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -2
Query: 252 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 109
QGVLGIKVKIML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 181 QGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 277 ATRHVLLRTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNGAQGRARA 131
AT RT S R G++ + P R+E + T RP PG+ + A A
Sbjct: 450 ATHFSAERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAA 498
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 334 TPLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 438
TPL H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 137 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 244
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 650 RADGSDPHFHAGVAVLGQLPXEELIEFCLEKPIS 751
R DG +PH A + G ++ CL +P S
Sbjct: 768 RQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSS 801
>04_03_0272 +
13725262-13725443,13726036-13726114,13726329-13726390,
13726575-13726700,13726780-13726879,13727143-13727226,
13727328-13727462
Length = 255
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -1
Query: 742 FFKA--ELNEFLXRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 569
FFKA E++ R+L + S VR + + M+ S+ +KG +++ S +
Sbjct: 137 FFKAHVEIHVSNKRQLLGEEISNFTVRDLQLLQNQVEMSLH--SIRNKKGSLVQKENSEL 194
Query: 568 QKRFNIPEQ-SVELY 527
+K+FNI Q ++EL+
Sbjct: 195 RKKFNIAHQRNIELH 209
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 252 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 109
Q VL I+ K ++ + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +2
Query: 266 MSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTY 445
+ GS +++ V R D +++Y+ G ++ +NN +++G HD N I
Sbjct: 746 IDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGNVIGQGDQ 805
Query: 446 SETSDKLVS 472
++ +S
Sbjct: 806 DSEKNRYLS 814
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 199 QERPEEATTRPHPGNGAQGRARAPR 125
Q R + +T RP PG ++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 64 DSGDRLRQRRGREGAHFAGRLEGHGLVLG 150
+ GD+ + +G EG +G GHG V+G
Sbjct: 164 EEGDKGMKVKGEEGCRASGSDSGHGCVIG 192
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 484 AESLRYKLIGGLAVRRACYGVLR 416
A S L+GG A ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 152 SVTRMWSGCGFFGPFLPCWSH 214
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = -1
Query: 448 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPCNDYVNTATR 269
A R A G++ + + G G SG+ RGQ +++ ++G + +Y++ A
Sbjct: 472 AARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLYQGYPVFREYLDEALV 531
Query: 268 HVL 260
+L
Sbjct: 532 EIL 534
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 189 PKKPQPDHILVTEPKDEPVPLEPTS 115
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,006,552
Number of Sequences: 37544
Number of extensions: 446087
Number of successful extensions: 1559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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