Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_G20
         (807 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM279494-1|CAK50613.1|  105|Homo sapiens immunoglobulin A heavy ...    31   4.9  
AY909655-1|AAY57103.1|   98|Homo sapiens immunoglobulin heavy ch...    30   8.6  
AY909654-1|AAY57102.1|   94|Homo sapiens immunoglobulin heavy ch...    30   8.6  
AY909652-1|AAY57100.1|   94|Homo sapiens immunoglobulin heavy ch...    30   8.6  
AY909651-1|AAY57099.1|  106|Homo sapiens immunoglobulin heavy ch...    30   8.6  

>AM279494-1|CAK50613.1|  105|Homo sapiens immunoglobulin A heavy
           chain variable region protein.
          Length = 105

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 CVRS-FVQAA*WQNWVWFA-SRSVLWLSNVKSNFNCCSWSDHALGR 270
           CV S F  ++ W +WV  A  + ++W+S +KS+ +  S++D   GR
Sbjct: 8   CVASGFSFSSYWMHWVRQAPGKGLVWVSRIKSDGSVTSYADSVEGR 53


>AY909655-1|AAY57103.1|   98|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 98

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 CVRS-FVQAA*WQNWVWFA-SRSVLWLSNVKSNFNCCSWSDHALGR 270
           C  S F  +  W +WV  A  + ++W+S +KS+ +  S++D   GR
Sbjct: 8   CAASGFTFSTYWMHWVRQAPGKGLVWVSRIKSDGSSTSYADSVKGR 53


>AY909654-1|AAY57102.1|   94|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 CVRS-FVQAA*WQNWVWFA-SRSVLWLSNVKSNFNCCSWSDHALGR 270
           C  S F  +  W +WV  A  + ++W+S +KS+ +  S++D   GR
Sbjct: 8   CAASGFTFSTYWMHWVRQAPGKGLVWVSRIKSDGSSTSYADSVKGR 53


>AY909652-1|AAY57100.1|   94|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 CVRS-FVQAA*WQNWVWFA-SRSVLWLSNVKSNFNCCSWSDHALGR 270
           C  S F  +  W +WV  A  + ++W+S +KS+ +  S++D   GR
Sbjct: 8   CAASGFTFSTYWMHWVRQAPGKGLVWVSRIKSDGSSTSYADSVKGR 53


>AY909651-1|AAY57099.1|  106|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 106

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 CVRS-FVQAA*WQNWVWFA-SRSVLWLSNVKSNFNCCSWSDHALGR 270
           C  S F  +  W +WV  A  + ++W+S +KS+ +  S++D   GR
Sbjct: 8   CAASGFTFSTYWMHWVRQAPGKGLVWVSRIKSDGSSTSYADSVKGR 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,073,294
Number of Sequences: 237096
Number of extensions: 1588665
Number of successful extensions: 3162
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3162
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)