BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_G19
(807 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 27 0.90
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 25 2.7
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 24 6.3
AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax home... 24 6.3
AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax home... 24 6.3
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 26.6 bits (56), Expect = 0.90
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 275 KKRIITLRKSLRVHTKR--AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKK 114
KK++ L + + +R A +EKIN FI S+ G+ + P D LKK
Sbjct: 53 KKKVFKLARLIPAVRRRVDAEIEKINAGFIKDISQTGNYYTELPHDSMGQAEILKK 108
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 804 LPHSNEXLNSAKEGSHYGIQXNGGTXED 721
+PH+N + G G+ NGGT D
Sbjct: 17 VPHANGHHQQHQNGHSNGVARNGGTATD 44
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 23.8 bits (49), Expect = 6.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 215 EKINLKFIDTSSKFGH-GRFQTPADKAAFMG 126
EKI S FG R+QTPAD MG
Sbjct: 288 EKIKAGKSKLSDYFGEFNRYQTPADAVCEMG 318
>AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax
homeotic protein IVa protein.
Length = 310
Score = 23.8 bits (49), Expect = 6.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -1
Query: 195 H*HLVQVRSWSIPDAG*QG-CIHGYTQEGSYSRRSCGYHNPSG 70
H H + S DA Q C Y EGSYS + CG SG
Sbjct: 56 HLHQTRTAQESPYDASIQAACKQIY--EGSYSSKDCGTKGTSG 96
>AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax
homeotic protein IIa protein.
Length = 327
Score = 23.8 bits (49), Expect = 6.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -1
Query: 195 H*HLVQVRSWSIPDAG*QG-CIHGYTQEGSYSRRSCGYHNPSG 70
H H + S DA Q C Y EGSYS + CG SG
Sbjct: 56 HLHQTRTAQESPYDASIQAACKQIY--EGSYSSKDCGTKGTSG 96
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,460
Number of Sequences: 2352
Number of extensions: 17337
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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