Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_G19
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 151 4e-37
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 241
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 241
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 143
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 144 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = -1
Query: 576 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -3
Query: 670 VFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
V A +MID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 241
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 143
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 144 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = -1
Query: 576 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -3
Query: 670 VFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
V A +MID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 715 EWAREHXEXPIPVDSVFAQDEMIDCIGVTXXKGYKGVTXRWHTKKXPRKTHQG 557
+WAREH E + VD+VFAQDEMID IGVT G+KGVT RWHTKK PRKTH+G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = -1
Query: 750 IQXNGGTXEDKVN-GPENXWRXLSLXILCLPKMK*LTALVSPXXKDTKVSLXVGTQRXYP 574
IQ NGGT E KV+ E+ + + + + T V+ V+ T++ P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-P 241
Query: 573 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 500
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,866,287
Number of Sequences: 27780
Number of extensions: 374364
Number of successful extensions: 896
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -