Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_G10
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0287 - 2094333-2094542,2094719-2095999 34 0.14
08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716... 33 0.19
05_06_0281 + 26912419-26913099 33 0.19
02_02_0063 + 6481568-6481570,6481922-6482470 33 0.33
11_07_0002 - 27171791-27172222 32 0.58
09_02_0279 + 6702517-6702948 32 0.58
02_01_0302 - 2021221-2023305 31 0.77
11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404... 31 1.0
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 31 1.0
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 31 1.0
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686... 31 1.3
12_02_0635 - 21430245-21431156 30 2.4
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 29 3.1
11_06_0610 - 25449085-25453284 29 3.1
11_01_0763 + 6402901-6403971,6404581-6404826 29 3.1
07_03_0315 - 16674660-16674712,16674966-16675158 29 3.1
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.1
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.1
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.1
01_06_0752 + 31704071-31704787 29 4.1
10_01_0144 - 1705429-1706250 28 7.2
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 28 7.2
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 8.3
07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239 28 9.5
03_06_0199 + 32310272-32311432 28 9.5
03_03_0164 - 14979364-14979479,14979613-14980102 28 9.5
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 28 9.5
>07_01_0287 - 2094333-2094542,2094719-2095999
Length = 496
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 204 PGSDLGGDRTSGVRVQGSRLVGGS*NSLGPRSAHNTMQIVESHIPRAPLLRGDLVG 37
PG + D SGV V R GG+ S P+ H T I+ I AP+ +G+LVG
Sbjct: 45 PGGHVAEDYRSGVGVPVGRDAGGA-TSSPPQPVHVTPSILVGSI-HAPVFQGELVG 98
>08_02_1258 -
25670092-25670152,25671124-25671327,25671400-25671611,
25671701-25671749,25671833-25672612,25672696-25672767,
25672907-25672954,25673053-25673127,25673238-25673312,
25673614-25673668,25673931-25674016,25674759-25674988
Length = 648
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2
Query: 551 RTGVFPPPAPGSTATDRCGKGXSSPSLAPXXP 646
R PPPA ST DR +G SSPSL P P
Sbjct: 6 RASASPPPASASTGGDR-KRGRSSPSLPPPPP 36
>05_06_0281 + 26912419-26913099
Length = 226
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 237 QPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 410
+P G P + P P+ ++ +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 433 ATGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTG 332
ATGRR A+RPGRLV + + G +R GP G
Sbjct: 130 ATGRRDAATRPGRLVAMAATV-GSRREERRGPAG 162
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 428 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 306
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 428 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 306
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>02_01_0302 - 2021221-2023305
Length = 694
Score = 31.5 bits (68), Expect = 0.77
Identities = 39/157 (24%), Positives = 54/157 (34%), Gaps = 3/157 (1%)
Frame = +2
Query: 188 PRSEPG*G-RGATA-VNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPL 361
P PG G +G A V++ RRRG P+ + + + + P
Sbjct: 389 PGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPP 448
Query: 362 VSRNTPLDQNQPAGSGRDTPSTGRSNHSTXXXXXXXXXXXXLTPSGRPLTFTGGEAATYR 541
S TP + P GS TPS N TPS P + +Y
Sbjct: 449 SSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPS-YPSPPSSSTTPSYH 507
Query: 542 GPGRTGVFPP-PAPGSTATDRCGKGXSSPSLAPXXPS 649
P + P P+P S++T S P P PS
Sbjct: 508 SPPQGHTTPSHPSPPSSST--APPSHSPPQSTPTHPS 542
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = +3
Query: 120 PRNFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 287
P++ THP SP + + P PD P + P + P P PS
Sbjct: 534 PQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPSTPPSSGSPPSPS 589
>11_03_0140 -
10637818-10638059,10638189-10638461,10639963-10640473,
10640556-10640768,10642717-10642784,10642893-10642958,
10644862-10644961
Length = 490
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +3
Query: 111 TAGPRNFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSR 290
TA + T P+N +P L +NP T G A+P D+ +P R
Sbjct: 86 TASLASRMTEPVNTTPTTLPTQGGSSAAENPSTSSNQSTGTSGASGFANPTDS-VAQPPR 144
Query: 291 RIEGSETSAVSVRQ 332
ET ++S ++
Sbjct: 145 STSRDETPSISEKE 158
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 PLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEGSET 311
P + SP L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 28 PEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDGDVP 82
Query: 312 SAVSVRQPV 338
+ V +P+
Sbjct: 83 AGTLVERPI 91
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 137 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 292
PP P D + P EP + +A T RR GSP PA A +A
Sbjct: 123 PPPPPPPPPSPKDAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>04_04_1019 +
30166514-30166585,30167207-30167841,30168505-30168645,
30169604-30170300
Length = 514
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 527 AATYRGPGRTGVFPPPAPGSTATDRCGKGXSS 622
AA ++ P +FPPP S+ TD CG G ++
Sbjct: 58 AAEWQLPAEPMLFPPPPSLSSTTDGCGAGGAA 89
>12_02_0635 - 21430245-21431156
Length = 303
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +3
Query: 120 PRNFRTHPLNDSPALLHPTSDPLRGQ--NPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 293
P++ R P P + P RG+ P G P+ P GA + QP P+
Sbjct: 198 PQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPGSPKKPATP-GAVVVE--QPGPPTDH 254
Query: 294 IEGSETSAVSV--RQPVGPPRRCRWCP 368
E E V V R P PPR CP
Sbjct: 255 REAGELVMVDVVVRPPTTPPRPYVGCP 281
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 29.5 bits (63), Expect = 3.1
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = +3
Query: 144 LNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVS 323
+ND A H D + G+ PD QP A P+D QP PS + TS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAH 233
Query: 324 VRQPVGPPRRCRWCPGIPRW-TRTSLPGRDAIHRRPV 431
R+ G P P W + LP R R P+
Sbjct: 234 PRRAHGQVLLGSH-PRGPHWRVQGHLPQRQGPRRVPI 269
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +3
Query: 174 TSDPLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPR 350
T P + P+E P S + P AHP P+E S E+S + + PP
Sbjct: 767 TPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPS 826
Query: 351 RCRWCPGIPRWTRTSLPGRDA 413
P P ++S P +A
Sbjct: 827 GHEGTPPSP--VKSSSPPPEA 845
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +2
Query: 134 DPPTKRL-PCTLTPDVRSP---PRSEP---G*GRGATAVNTTTRRRGSPQGRPADGAFEA 292
DP + L P + +PD+ P P G GRGA R RG G DGA +
Sbjct: 24 DPSEETLDPASPSPDLAIPWPDPAGVDAGGGGGRGAATHQGRRRWRGVGSGGGGDGAATS 83
Query: 293 NRRL*NVGRLGTAARRAAQ 349
RRL AA R A+
Sbjct: 84 RRRLARQPAAAVAAARCAR 102
>07_03_0315 - 16674660-16674712,16674966-16675158
Length = 81
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 430 TGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVSEPSIRLEGSVG 272
TG + + S GR +L I +R R+G P GC+ + S I L VG
Sbjct: 11 TGEKGVRSGVGRDILRDEKIK--ERKRMGQPAGCQADLLICSPVKINLFSQVG 61
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 318 VSVRQPVGPPRRCRWCPGIPRWTR 389
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 398 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 315
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 175 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 264
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 551 RTGVFPPPAPGSTATDRC 604
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>10_01_0144 - 1705429-1706250
Length = 273
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 521 GEAATYRGPGRTGVFPPPAPGSTATD-RCGKGXSSPSLAPXXPS 649
G+A +G R G+ PPP P D + +G +AP P+
Sbjct: 49 GKAGRQQGRRRWGLLPPPTPDGWGPDGKQAEGRRRVEVAPAPPT 92
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 138 HPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAH 257
HPL P +P G P++ G PR T+ +GAAH
Sbjct: 91 HPLPQVPNFCGNGFNPWTGTLPEK-NGFPRGTMGWEGAAH 129
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 25.8 bits (54), Expect(2) = 8.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 107 ADRGPKEF*DPPTKRLPCTLTPDV-----RSPPRSEPG*GRGATAVNTTTRRRGSPQGRP 271
A R E P +R P +TP V RSP P RG A + + RG P G P
Sbjct: 55 APRSGDEEITPWWRRSPSAVTPPVYPHVERSP---SPPIARGWPADDDERQERGEPSGSP 111
Query: 272 A 274
A
Sbjct: 112 A 112
Score = 20.6 bits (41), Expect(2) = 8.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 347 QTVPLVSRNTPLDQNQPA 400
Q P V ++TPL +PA
Sbjct: 153 QPAPHVEQSTPLPAKEPA 170
>07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239
Length = 569
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 51 RAKGARGVCETQRSAWCCEQTAGPRNFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRS 230
R +GA G WCC P++ P P+L P + +P GG R+
Sbjct: 13 RRRGAAGSAARTPRGWCCSFAGVPQSPDLRPF--PPSLAPPAT--AASSSPAPGGGAGRN 68
Query: 231 TLQP 242
L P
Sbjct: 69 KLPP 72
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 81 SHIPRAPLLRGDLVGGSALYPKKKKK 4
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 189 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE-GSETSAVSVRQPVGPPRRCR 359
RG+ G +T+ DG+ H + P P R + G E V+ P G RR R
Sbjct: 83 RGRRRQRRGPGTATTMLEDGSIHTQRGSPPLPPRSGQRGGEEGEVAAAAPGGGGRRWR 140
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 27.9 bits (59), Expect = 9.5
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +2
Query: 137 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGA--FEANRRL*N 310
PP + + TL +RS R P GRGATA + G + PA GA R
Sbjct: 109 PPVRAVSRTL--GLRSA-RPAPC-GRGATAARANSSPYGGGRSAPAAGARGRGGGRGTQA 164
Query: 311 VGRLGTAARRAAQTVPLVSR-NTPLDQN 391
G G RR+ T VS N +D +
Sbjct: 165 TGARGRGGRRSTSTAATVSEVNLDVDSD 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,850,735
Number of Sequences: 37544
Number of extensions: 534611
Number of successful extensions: 2275
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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