Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_G03
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 90 2e-18
Z49128-6|CAA88957.1| 621|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical pr... 29 3.0
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 9.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 9.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 9.1
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Frame = -3
Query: 574 RIGSVLXLGIAYAGTQTR-------RCAVPLASRAQRTRPPPA--EICALAAISCGLIAV 422
R+GS+L LG+AYA ++ R + + + P A E+ LA +S GLI V
Sbjct: 466 RVGSILGLGLAYANSKRETVTKNEERGVIFELKKVLSDQKPSAIPEVKGLAGLSLGLILV 525
Query: 421 GSCNGDVSCAIIQRLIDDNKDLHSSTYARXXXXXXXXXXXXCKERTEATMAALEVLPEPQ 242
G+ + + + ++Q L+D ++ + R +++++ + +L LP+P
Sbjct: 526 GTADAEAAMEMLQALMDKSETELTDPNMRFLALGIALIFLQTQDKSDVFVESLRSLPDPF 585
Query: 241 QSLCQTTLSMCAYAGTGDVLVVQQMLHICSKHYETDNEQSST 116
++ T + +CAYAGTG+VL +Q++LH+CS+HYET + T
Sbjct: 586 GAMVSTLVEVCAYAGTGNVLKIQKLLHLCSEHYETPAAEKKT 627
>Z49128-6|CAA88957.1| 621|Caenorhabditis elegans Hypothetical
protein M03C11.7 protein.
Length = 621
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = -3
Query: 295 KERTEATMAALEVLPEPQ---QSLCQTTLSMCAYAGTG-DVLVVQQMLHICSKHYETDNE 128
KE+TE LE PEP+ +L + + T + V +QM KH + E
Sbjct: 394 KEKTEKIRLGLEKAPEPKVKISNLMRVLGNEAIQDPTKMEAQVRKQMAERLKKHETLNAE 453
Query: 127 QSSTEDTAFKKQDKKDAKETT 65
+ TED K+ KK +++T+
Sbjct: 454 RKLTEDQKRAKKTKKLSEDTS 474
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 216 DSVVWQSDCCGSGSTSNAAIVASVRSLQPKKHSPSPK 326
D + +S+ CG+ I ++V S QPK +P+P+
Sbjct: 300 DKIYVKSEYCGAPGEKVTTISSNVSSQQPKSKAPAPR 336
>Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical
protein F19C6.3 protein.
Length = 429
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 368 IVNQSLNDCTRHIAIARSNGDEPAGDGGECADLGRGRSCSLSTGSKWDST 517
+ N+ N C + AR +P C D RG CS TG + + T
Sbjct: 324 VYNEKFNCCPKCRDFARFCAVKPCHKYATCTDSKRGPKCSCDTGFQGNGT 373
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical protein
C01F4.2a protein.
Length = 986
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +3
Query: 156 QMCSICCTTSTSPVPAYAHMDSVVWQSDCCGSGSTSNAAIVASVRSLQPKKHSPSPKCRN 335
+ CS T T P A SV S CGS STSN+ + SLQ S S R+
Sbjct: 882 EFCSDELTFGTISQPETARERSVT-MSTACGSPSTSNSKKTPMMASLQGATTSKSVDARS 940
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 240 CCGSGSTSNAAIVASVRSLQPKKHSP-SPKCRNLA*VDECKSLLSSINR*MIAQDTSPLH 416
CC SGS S +AI+ S + P + K +N + KS S +R +D PL
Sbjct: 708 CCSSGSNSGSAIIDSDTNSTTNPSQPETTKTKN----NTKKSNSSKKHRKPKKKDVDPLS 763
Query: 417 DP 422
DP
Sbjct: 764 DP 765
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 557 GSRYCICGNTNEKMCCPTCFPC 492
GS +CGN+ E + CPT + C
Sbjct: 1881 GSSPVLCGNSAESIGCPTSYYC 1902
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 517 CAVPLASRAQRTRP-PPAEICALAAISCGLIAVGSCNGDVSC 395
C P+ ++ Q P P IC+L+ C ++ SC+ C
Sbjct: 2061 CQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADC 2102
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 517 CAVPLASRAQRTRP-PPAEICALAAISCGLIAVGSCNGDVSC 395
C P+ ++ Q P P IC+L+ C ++ SC+ C
Sbjct: 2645 CQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADC 2686
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 517 CAVPLASRAQRTRP-PPAEICALAAISCGLIAVGSCNGDVSC 395
C P+ ++ Q P P IC+L+ C ++ SC+ C
Sbjct: 2061 CQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADC 2102
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 517 CAVPLASRAQRTRP-PPAEICALAAISCGLIAVGSCNGDVSC 395
C P+ ++ Q P P IC+L+ C ++ SC+ C
Sbjct: 2645 CQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADC 2686
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 517 CAVPLASRAQRTRP-PPAEICALAAISCGLIAVGSCNGDVSC 395
C P+ ++ Q P P IC+L+ C ++ SC+ C
Sbjct: 2645 CQCPINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADC 2686
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,912,655
Number of Sequences: 27780
Number of extensions: 308397
Number of successful extensions: 1223
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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