Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_F18
         (866 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    32   0.026
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.42 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.2  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   9.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 31.9 bits (69), Expect = 0.026
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = -3

Query: 816 GGXXGGXVGXXQGGXXGXGXXTXXTGXRRXRXXXEGGXXXGXGXXG 679
           GG  GG  G   GG  G G      G  R R   +GG   G G  G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
 Frame = +3

Query: 483 PPPPPPXXXXXAPKXXGXGGGXXXXXXXYYXXISPPXGXGXXGAXATPPXPXXXXYXXPX 662
           PPPPPP     +P   G  GG             PP         A PP      Y    
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGS--------RPPLPNLLGFGGAAPPVTILVPYPIII 636

Query: 663 PLXVXAP-PVP 692
           PL +  P P+P
Sbjct: 637 PLPLPIPVPIP 647



 Score = 23.8 bits (49), Expect = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 480 PPPPPPP 500
           PPPPPPP
Sbjct: 530 PPPPPPP 536



 Score = 23.8 bits (49), Expect = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 481 PPPPPPP 501
           PPPPPPP
Sbjct: 530 PPPPPPP 536



 Score = 23.4 bits (48), Expect = 9.1
 Identities = 18/66 (27%), Positives = 20/66 (30%)
 Frame = +2

Query: 623 PPXPXXTXLXXSXPXGRPXPXXPXPXXXPPSXXXRXRRXPVXXVXXPXPLXPPCXLPTXP 802
           PP P    +    P   P P         P    + R  P      P    PP   P  P
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLR-FPAGFPNLPNAQPPPAP-PPPP 589

Query: 803 PXXPPP 820
           P  PPP
Sbjct: 590 PMGPPP 595


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 480 PPPPPPPXXXXXAP 521
           PPPPPPP     +P
Sbjct: 783 PPPPPPPPPSSLSP 796



 Score = 24.2 bits (50), Expect = 5.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 472 VXXPPPPPPP 501
           +  PPPPPPP
Sbjct: 780 IGSPPPPPPP 789


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 541 PPXPXXFGAXXXKXGGGGGGG 479
           P  P   G      GGGGGGG
Sbjct: 540 PVGPAGVGGGGGGGGGGGGGG 560


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 520 GAXXXKXGGGGGGG 479
           G    K GGGGGGG
Sbjct: 242 GKMHHKAGGGGGGG 255


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 532 PXXFGAXXXKXGGGGGGG 479
           P  + A   + GGGGGGG
Sbjct: 3   PYGWPASPLRAGGGGGGG 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,879
Number of Sequences: 2352
Number of extensions: 7377
Number of successful extensions: 267
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)