Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_F14
(982 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 36 0.037
01_06_0146 + 26969011-26969995,26970878-26970930 36 0.065
06_01_0486 - 3455030-3455770 35 0.11
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.35
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 31 1.4
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 30 2.5
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 30 3.2
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 30 3.2
11_06_0610 - 25449085-25453284 29 4.3
09_02_0543 + 10427321-10428315,10428440-10429154 29 4.3
08_01_0059 - 394001-394708 29 5.7
06_03_0905 + 25843547-25844314 29 5.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.7
04_03_1022 - 21778315-21779007 29 7.5
11_01_0066 - 536281-537196,537397-537452 28 9.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.9
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 28 9.9
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 28 9.9
04_04_1413 - 33386049-33386339 28 9.9
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 28 9.9
>04_03_0904 + 20717005-20718087
Length = 360
Score = 36.3 bits (80), Expect = 0.037
Identities = 30/120 (25%), Positives = 31/120 (25%)
Frame = +2
Query: 425 KPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXX 604
KP P TP P P P P PTPT P T
Sbjct: 77 KPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPT--PPTYKPQPKPTP 134
Query: 605 XPXRRPPTXXGPXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXXTXSSXPNXXPHTP 784
P PT P P P TP P T P P P+TP
Sbjct: 135 APYTPTPT---PPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTP 191
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/77 (23%), Positives = 20/77 (25%)
Frame = +2
Query: 443 PRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRP 622
P+ P P + P P P P P PT T P
Sbjct: 234 PKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPT 293
Query: 623 PTXXGPXLTNPNPDATP 673
P P P P TP
Sbjct: 294 PKPNPPPTYKPQPKPTP 310
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 35.5 bits (78), Expect = 0.065
Identities = 24/83 (28%), Positives = 27/83 (32%)
Frame = +2
Query: 428 PXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXX 607
P A TP P G P P PAP P P+P P R
Sbjct: 50 PASAAAPTTPSPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAP 109
Query: 608 PXRRPPTXXGPXLTNPNPDATPG 676
PP+ P P+P A PG
Sbjct: 110 DQPAPPSP--PPSLPPSPPA-PG 129
>06_01_0486 - 3455030-3455770
Length = 246
Score = 34.7 bits (76), Expect = 0.11
Identities = 26/100 (26%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Frame = +2
Query: 386 GHHXXXXSHHHAXKPXGXAPR----XTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXP 553
GHH HHH KP +PR P P P P P P PT P
Sbjct: 52 GHHGKPPEHHHHHKPP-PSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPP 110
Query: 554 XXTRXXXXXXXXXXXXXXPXRRPPTXXGPXLTNPNPDATP 673
P PP P +P P P
Sbjct: 111 YVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPP 150
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/91 (24%), Positives = 26/91 (28%)
Frame = +1
Query: 409 APSRXQTXXXSAAXNXTTQXQGXPTPTXTXXXPRTPPXXXPXPXXXXXXXXXXXXXXXXX 588
+PSR Q+ +A + P P P PP P P
Sbjct: 296 SPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPP 355
Query: 589 APXPXXPLPTPXDAXGTPPNQP*PRRHAGXA 681
P P P P P G P P G A
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 425 KPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXP 553
KP AP P P P P P P PP P P
Sbjct: 320 KPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 31.1 bits (67), Expect = 1.4
Identities = 34/132 (25%), Positives = 36/132 (27%), Gaps = 7/132 (5%)
Frame = +2
Query: 407 SHHHAXKPXGXAPRXTPQPXXRGX-PXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXX 583
+HHHA KP P P P P P PA P PPT P
Sbjct: 186 THHHA-KPPSLPPAEPPVPSPSPEHPPRHSPSKPPA--YAPAKPPTALRPAIPPAAMPKP 242
Query: 584 XXXXXXXXPXR------RPPTXXGPXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXX 745
P R +PP P L P T PP A P
Sbjct: 243 PSVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSP 302
Query: 746 TXSSXPNXXPHT 781
SS P T
Sbjct: 303 KNSSSSPPPPCT 314
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 592 PXPXXPLPTPXDAXGTPPNQP*PRRHAGXAXXTXRPG 702
P P P P+P PP P PR+H G A G
Sbjct: 330 PSPSPPFPSPPSPP-PPPTSPSPRQHRGWAIFAPHGG 365
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 456 HNPXXGEXHXXXNPXXP--PHPXXXRPXPXPPQXRXXHAXPHP 578
H+P H +P P PHP P P H PHP
Sbjct: 41 HHPHPPHHHPPHHPHPPHHPHPPHHPHPPHHPHPPHHHPHPHP 83
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/127 (21%), Positives = 37/127 (29%), Gaps = 4/127 (3%)
Frame = +2
Query: 455 PQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRPPTXX 634
PQP + P P P PP P ++ P PPT
Sbjct: 254 PQPQHQAPPPSHPPALPALPAPNAPPPPAPQSQPPSQFPGHLPHSQVQSVPP--APPTPL 311
Query: 635 GPXLTNPN---PDATPGXHXTHXDXXXPP-XXTXAXNXPXXTXSSXPNXXPHTPXLXXRA 802
P + + P A TH PP + A P + P ++ A
Sbjct: 312 APTIPQESYYPPSAVQPTDTTHQQYQAPPAPQSQAPPAPPQHYQTPPQYAQYSQPPPASA 371
Query: 803 HXSTXAP 823
+ ST P
Sbjct: 372 NPSTAVP 378
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/82 (21%), Positives = 25/82 (30%)
Frame = +2
Query: 428 PXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXX 607
P AP +P P + P P P P PP P
Sbjct: 1168 PPPPAPVISPPPPVKS-PPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPP 1226
Query: 608 PXRRPPTXXGPXLTNPNPDATP 673
P + P P ++ P P+ +P
Sbjct: 1227 PPVKSPPPPAPVISPPPPEKSP 1248
Score = 29.1 bits (62), Expect = 5.7
Identities = 24/119 (20%), Positives = 33/119 (27%), Gaps = 1/119 (0%)
Frame = +1
Query: 463 QXQGXPTPTXTXXXPRTPPXXXPXPXXXXXXXXXXXXXXXXXAPXPXXPLP-TPXDAXGT 639
+ + PTPT + P P P P A P P TP T
Sbjct: 552 EGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKST 611
Query: 640 PPNQP*PRRHAGXAXXTXRPGXXXXADAGPQXPXXXPLKPXQRXTPHAXPXXASXXXHT 816
PP + P A P + P+ P + + P + HT
Sbjct: 612 PPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHT 670
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 443 PRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXP 553
PR TP P + P P P P P PP P P
Sbjct: 16 PRPTPAP--QATPPPAIPESGPPPPPAPDMPPPPPTP 50
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 428 PXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTP 544
P PR P P P P+P P PPTP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTP 40
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/86 (23%), Positives = 23/86 (26%)
Frame = +2
Query: 413 HHAXKPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXX 592
H + P P P P P P P P P P +
Sbjct: 45 HPSPSPGHPKGPKNPTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPP---KGPVTRPPPV 101
Query: 593 XXXXXPXRRPPTXXGPXLTNPNPDAT 670
P PP GP +T P P T
Sbjct: 102 TYPTPPVTTPPVVVGPPVTYPTPPVT 127
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 5.7
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 425 KPXGXAPRXTPQ--PXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXX 598
+P P P P G P P P P PP P P
Sbjct: 244 QPEANKPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMG-MPPRIPPPPVGG 302
Query: 599 XXXPXRRPPTXXGPXLTNPNPDATPG 676
P PP GP + P P T G
Sbjct: 303 TQPPPPPPPLANGPPRSIPPPPMTGG 328
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 410 HHHAXKPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTP 544
HHH AP TP P P P P P P P
Sbjct: 91 HHHHPPTPAPAPSTTPGGHGGVPPYYPPPPVTPTPYYYPSPAPPP 135
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +1
Query: 478 PTPTXTXXXPRT-PPXXXPXPXXXXXXXXXXXXXXXXXA-PXPXXPLPTPXDAXGTPPNQ 651
PTP PR PP P P A P P P PT A TPP
Sbjct: 198 PTPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPI 257
Query: 652 P 654
P
Sbjct: 258 P 258
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.9
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 478 PTPTXTXXXPRTPPXXXPXPXXXXXXXXXXXXXXXXXAPXPXXPLPTPXDAXGTPPNQP* 657
P+P+ T P PP P P P P PLP A PP P
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPP----PPPPPPLPQSNYASSQPPPPPP 590
Query: 658 P 660
P
Sbjct: 591 P 591
Score = 28.3 bits (60), Expect = 9.9
Identities = 26/124 (20%), Positives = 31/124 (25%)
Frame = +2
Query: 452 TPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRPPTX 631
+P P P P P+ PP P P P PP
Sbjct: 536 SPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL- 594
Query: 632 XGPXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXXTXSSXPNXXPHTPXLXXRAHXS 811
P P+P P + PP P + P P P L R
Sbjct: 595 --PNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPP 652
Query: 812 TXAP 823
AP
Sbjct: 653 PPAP 656
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 440 APRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPT 547
AP +P P G P PAP P PPTP+
Sbjct: 139 APSASP-PSTPGGPAPTPTPTRPAPSPSPTGPPTPS 173
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 413 HHAXKPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXP 553
HH P TP P P P P P PTP P
Sbjct: 85 HHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFP 131
>04_04_1413 - 33386049-33386339
Length = 96
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 589 RXXXGWGXACXXRXCGGXGXGRXXXGCGGXXG 494
R G G CGG G G GCGG G
Sbjct: 60 RTGGGGGGGGGGGGCGGGGGGGGGGGCGGGGG 91
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 28.3 bits (60), Expect = 9.9
Identities = 23/89 (25%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = +2
Query: 413 HHAXKPXGXAPRXTPQPXXRGXPXXXXPXXXPAPXXXPXXP-PTPTXPXXTRXXXXXXXX 589
HH KP G P+ P P + P P P P P P P
Sbjct: 154 HHGPKP-GPKPKPKPSP-PKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKP 211
Query: 590 XXXXXXPXRRPPTXXGPXLTNPNPDATPG 676
P PP P + P P PG
Sbjct: 212 PKPGPKPKPGPPQPWWP-IPFPKPPCPPG 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,501
Number of Sequences: 37544
Number of extensions: 200564
Number of successful extensions: 1364
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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