Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_F14
(982 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 34 0.91
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 34 0.91
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 34 0.91
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 31 4.9
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 8.5
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 8.5
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 8.5
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 8.5
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 33.9 bits (74), Expect = 0.91
Identities = 34/168 (20%), Positives = 39/168 (23%), Gaps = 2/168 (1%)
Frame = +2
Query: 452 TPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRPPTX 631
TP P P P PA TP+ P T PPT
Sbjct: 868 TPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS 927
Query: 632 XG--PXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXXTXSSXPNXXPHTPXLXXRAH 805
P T P+P T PP T T + P P P
Sbjct: 928 TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP 987
Query: 806 XSTXAPXXTXTXXAXRPXKNNXAEXGXRPAXPAXIQPRXPXRXXATXP 949
T P T P P+ P P + P
Sbjct: 988 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 1035
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 33.9 bits (74), Expect = 0.91
Identities = 34/168 (20%), Positives = 39/168 (23%), Gaps = 2/168 (1%)
Frame = +2
Query: 452 TPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRPPTX 631
TP P P P PA TP+ P T PPT
Sbjct: 151 TPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS 210
Query: 632 XG--PXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXXTXSSXPNXXPHTPXLXXRAH 805
P T P+P T PP T T + P P P
Sbjct: 211 TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP 270
Query: 806 XSTXAPXXTXTXXAXRPXKNNXAEXGXRPAXPAXIQPRXPXRXXATXP 949
T P T P P+ P P + P
Sbjct: 271 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 318
Score = 30.7 bits (66), Expect = 8.5
Identities = 36/180 (20%), Positives = 42/180 (23%), Gaps = 11/180 (6%)
Frame = +2
Query: 443 PRXTPQPXXRGX---PXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPX 613
P TP P P P P TP+ P T
Sbjct: 60 PTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTT 119
Query: 614 RRPP--TXXGPXLTNPNPDATPGXHXTHXDXXXPPXXTXA------XNXPXXTXSSXPNX 769
PP T P T P+P T T PP T + P T + P
Sbjct: 120 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 179
Query: 770 XPHTPXLXXRAHXSTXAPXXTXTXXAXRPXKNNXAEXGXRPAXPAXIQPRXPXRXXATXP 949
P P T P T P P+ P P + P
Sbjct: 180 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 239
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 33.9 bits (74), Expect = 0.91
Identities = 34/168 (20%), Positives = 39/168 (23%), Gaps = 2/168 (1%)
Frame = +2
Query: 452 TPQPXXRGXPXXXXPXXXPAPXXXPXXPPTPTXPXXTRXXXXXXXXXXXXXXPXRRPPTX 631
TP P P P PA TP+ P T PPT
Sbjct: 1493 TPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS 1552
Query: 632 XG--PXLTNPNPDATPGXHXTHXDXXXPPXXTXAXNXPXXTXSSXPNXXPHTPXLXXRAH 805
P T P+P T PP T T + P P P
Sbjct: 1553 TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP 1612
Query: 806 XSTXAPXXTXTXXAXRPXKNNXAEXGXRPAXPAXIQPRXPXRXXATXP 949
T P T P P+ P P + P
Sbjct: 1613 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 1660
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 31.5 bits (68), Expect = 4.9
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 495 PXXPPHPXXXRPXPXPPQXRXXHAXPHPXXXRPXAXXXPXDAXRRXG 635
P PP P +P P PP P P P A P +A G
Sbjct: 24 PPPPPRPPKQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 30.7 bits (66), Expect = 8.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 495 PXXPPHPXXXRPXPXPPQXRXXHAXPHPXXXRPXAXXXPXDAXRRXG 635
P PP P +P P PP P P P A P +A G
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 8.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 495 PXXPPHPXXXRPXPXPPQXRXXHAXPHPXXXRPXAXXXPXDAXRRXG 635
P PP P +P P PP P P P A P +A G
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 8.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 495 PXXPPHPXXXRPXPXPPQXRXXHAXPHPXXXRPXAXXXPXDAXRRXG 635
P PP P +P P PP P P P A P +A G
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 30.7 bits (66), Expect = 8.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 495 PXXPPHPXXXRPXPXPPQXRXXHAXPHPXXXRPXAXXXPXDAXRRXG 635
P PP P +P P PP P P P A P +A G
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,812,921
Number of Sequences: 237096
Number of extensions: 1088552
Number of successful extensions: 5236
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4748
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13102819592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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