Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_F13
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...    95   6e-20
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...    90   2e-18

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 46/91 (50%), Positives = 51/91 (56%)
 Frame = -1

Query: 388 ASXEYDXXEXSITXMGGFPHYGEVXNDFVMIKGCCMGXXXXXXXXXXXXRVHTKRXAXVX 209
           A  E+D  E  IT MGGFPHYG V  D++MIKGCC+G               T R A   
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357

Query: 208 INLXFIDTSSKFGHGXFQTPADKXAFMGTXK 116
           I L FIDTSSKFGHG FQT  +K  F G  K
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -3

Query: 629 KGXGYKGCHXXLAHXEVTPVRHXRVVRKVACXGXWHHSRXSFTVARAGQXGYHHRXXMXK 450
           KG GY+G         + P +  R +RKVAC G WH +R S+TVARAGQ GYHHR  M K
Sbjct: 225 KGKGYEGVVTRWGVTRL-PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNK 283

Query: 449 KIXRIG 432
           K+ +IG
Sbjct: 284 KVYKIG 289



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 663 QDEMIDCIGVXQGQXIQRVSFXVGTQXSYPRKTXQG 556
           +DEMID IGV +G+  + V    G     PRKT +G
Sbjct: 214 KDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRG 248


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 43/83 (51%), Positives = 48/83 (57%)
 Frame = -1

Query: 388 ASXEYDXXEXSITXMGGFPHYGEVXNDFVMIKGCCMGXXXXXXXXXXXXRVHTKRXAXVX 209
           A  E+D  E  IT MGGFPHYG V  D++MIKGCC+G               T R A   
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357

Query: 208 INLXFIDTSSKFGHGXFQTPADK 140
           I L FIDTSSKFGHG FQT  +K
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEK 380



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -3

Query: 629 KGXGYKGCHXXLAHXEVTPVRHXRVVRKVACXGXWHHSRXSFTVARAGQXGYHHRXXMXK 450
           KG GY+G         + P +  R +RKVAC G WH +R S+TVARAGQ GYHHR  M K
Sbjct: 225 KGKGYEGVVTRWGVTRL-PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNK 283

Query: 449 KIXRIG 432
           K+ +IG
Sbjct: 284 KVYKIG 289



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 663 QDEMIDCIGVXQGQXIQRVSFXVGTQXSYPRKTXQG 556
           +DEMID IGV +G+  + V    G     PRKT +G
Sbjct: 214 KDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRG 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,546,508
Number of Sequences: 37544
Number of extensions: 203961
Number of successful extensions: 248
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)