Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_F10
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 275 3e-74
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 275 3e-74
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 275 3e-74
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 275 3e-74
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 275 3e-74
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 275 3e-74
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 243 1e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 243 1e-64
U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 30 2.3
AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 30 2.3
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 305
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 365
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 366 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 305
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 365
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 366 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 150
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 151 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 207
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 208 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 267
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 268 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 305
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 365
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 366 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 150
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 151 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 207
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 208 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 267
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 268 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 275 bits (674), Expect = 3e-74
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Frame = -3
Query: 726 TIETS-EWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXL 550
TIE +WAREH EK + VD+VFAQDEMID IGVTR K + P + K L
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 549 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 370
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFD 305
Query: 369 LSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFI 190
L++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+I
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWI 365
Query: 189 DTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
DTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 366 DTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 243 bits (595), Expect = 1e-64
Identities = 119/190 (62%), Positives = 142/190 (74%)
Frame = -3
Query: 666 VFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARA 487
V A +MID IGVTR K + P + K LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 486 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 307
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 306 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 127
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 126 GTLKKDRIRE 97
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 243 bits (595), Expect = 1e-64
Identities = 119/190 (62%), Positives = 142/190 (74%)
Frame = -3
Query: 666 VFAQDEMIDCIGVTRAKDTKVSLFVGTQRSYPVRHTKXLRKVACIGAWHPSRVSFTVARA 487
V A +MID IGVTR K + P + K LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 486 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 307
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 306 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 127
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 126 GTLKKDRIRE 97
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c
protein 3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 717 TSEWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVG 589
T +W E + PI +DS DE + C+ ++ + + +FVG
Sbjct: 54 TVKWIDEDGD-PISIDSQMELDEAVRCLNSSQEAELNIHVFVG 95
>AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase
C3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 717 TSEWAREHXEKPIPVDSVFAQDEMIDCIGVTRAKDTKVSLFVG 589
T +W E + PI +DS DE + C+ ++ + + +FVG
Sbjct: 54 TVKWIDEDGD-PISIDSQMELDEAVRCLNSSQEAELNIHVFVG 95
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 10 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 129
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,234,496
Number of Sequences: 27780
Number of extensions: 433579
Number of successful extensions: 1116
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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