Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_F07
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37352-1|CAA85604.1|  124|Homo sapiens immunoglobulin lambda cha...    32   2.6  
AL117478-1|CAB55951.1|  698|Homo sapiens hypothetical protein pr...    32   2.6  
DQ098817-1|AAZ13745.1|  108|Homo sapiens immunoglobulin lambda l...    31   6.1  
AY942109-1|AAY33457.1|  108|Homo sapiens anti-rabies virus immun...    31   6.1  
AF103643-1|AAD16703.1|  109|Homo sapiens immunoglobulin lambda l...    30   8.0  

>Z37352-1|CAA85604.1|  124|Homo sapiens immunoglobulin lambda chain
           variable region protein.
          Length = 124

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 610 GCGSRFSGSLSGNRTLIPVTRDNHGXRXNYH 702
           G   RFSGS+SGNR  + ++R   G   +Y+
Sbjct: 56  GTPDRFSGSISGNRATLTISRVEAGDEADYY 86


>AL117478-1|CAB55951.1|  698|Homo sapiens hypothetical protein
           protein.
          Length = 698

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 147 PRSYSIIPCTKYSSSIFSPL*AP*FVQSKIVGPPRHSPKS 266
           P++  ++PC     ++ SP  +P    S+++GPPR  P S
Sbjct: 462 PQALPVLPCPAKCETLLSPPPSPKVSLSRLLGPPRTGPCS 501


>DQ098817-1|AAZ13745.1|  108|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 108

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 610 GCGSRFSGSLSGNRTLIPVTRDNHGXRXNYH 702
           G   RFSGS SGN   + +TR   G   NY+
Sbjct: 56  GIPERFSGSNSGNTATLNITRVEAGDEANYY 86


>AY942109-1|AAY33457.1|  108|Homo sapiens anti-rabies virus
           immunoglobulin light chain variable region protein.
          Length = 108

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 610 GCGSRFSGSLSGNRTLIPVTRDNHGXRXNYH 702
           G   RFSGS SGN   + ++R   G   +YH
Sbjct: 56  GISERFSGSNSGNTATLTISRVEAGDEADYH 86


>AF103643-1|AAD16703.1|  109|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 109

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 610 GCGSRFSGSLSGNRTLIPVTRDNHGXRXNYH 702
           G   RFSGS SGN   + ++R   G   +YH
Sbjct: 49  GIPERFSGSNSGNTATLTISRAEAGDEADYH 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,895,402
Number of Sequences: 237096
Number of extensions: 2094894
Number of successful extensions: 6033
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6033
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)